| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1926 |
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| Symbol | |
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| ID | 4202752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2161565 |
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| End bp | 2163100 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638082795 |
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| Product | phosphodiesterase |
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| Protein accession | YP_696359 |
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| Protein GI | 110800228 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGTAG GAATACTTAT AGGAATAATA ATATTAGGGG TAGTAGGGTT TATTCAATAC
ACTCTTATAC AAAAAGCTTC AAAAAATAGG GTGGAAAGCT TAGAAAAAGA AGCTAGTTTA
ACACTTGAGG AGGCTAAAAG AGAAGCTGAA TCAACAAAGA AAGAAGCCAT ATTAGAAGCT
AAAGAAGAGG TGCACAAACT AAGAGCAGAT CTTGATAAAG AAACTCGTGA CAGAAGAAAT
GAGATTCAAA GGTTTGAAAG AAGACTTATC CAAAGGGAAG AGTCATTAGA TAAAAAAGGT
GAAATGCTTG AAAAAAGAGA AGATAGCATA AACAAAAAAT CTATAGAGAT TCAAGAACTT
GAAGAACGTG TACAAAATTT ATACGGTGAA CAAAGAGCTG AACTTGAGAG AATTTCAAAT
CTTTCAAGTG AAGACGCAAG AACATTATTA TTAGATGAAG TAAGAAGAGA AATAAAACAT
GAATCAGCTA TGCTGATCAA AGAACTTGAG ACTAAGGCCA AAGAAGAAGC TGATAAAAAA
TCAAGAGAAA TAATTACTAC TGCTATTCAA AGATGTGCAG CAGATCATGT TTCTGAAACT
ACAGTACATG TTGTTGCCCT ACCTAATGAT GAGATGAAAG GAAGAATCAT TGGTAGAGAA
GGTAGAAATA TAAGAACTTT AGAAACATTA ACAGGAGTTG ACTTAATAAT AGATGATACT
CCAGAGGCTG TTATTCTTTC AAGCTTCGAT CCAATAAGAA GAGAAGTTGC TAGAATAGCT
TTAGAAAAAT TAATTGTAGA TGGAAGAATT CATCCAGCTA GAATTGAAGA AATGGTAGAA
AGAGCTATTA AAGATGTAGA AAATGACATT AAGGAAGAGG GAGAACAAGC AACTTTCGAA
ACTGGTGTTC ATGGATTACA TCCAGAAATA ATTAAGCTTC TAGGAAGACT AAAGTACAGA
ACAAGTTATG GTCAAAATGT TTTAAAACAT TCAATAGAGG TTTCATATTT AGCAGGATTA
ATGGCATCTG AATTAGGTTT AGATGTAAAT CTAGCTAGAA GAGCAGGTCT TTTACATGAT
ATAGGTAAAG GGGTTGACCA AGAATATGAG GGTCCTCATG CTGTTATAGG TGGAGAACTT
GCAAAGAAAT ATCATGAATC ACCAGCTGTG GTAAATGCTA TAGCAGCCCA TCATGGTGAT
ACAGAAATGC AAACTCTTGA AGCAGTACTT GTTCAAGCAG CAGATGCTAT ATCAGCAGCT
AGACCTGGTG CAAGAAGAGA AACTTTAGAA GCTTATATTA AGAGATTAGA AAAATTAGAA
GAAATAGCTA CTTCATATGA AGGTGTAGAA AAGTCATATG CCATTCAAGC TGGAAGAGAA
ATTAGAATTA TGGTTAAACC AGATCAAGTT GACGATGCAG GGGCAATTGA GATGGCGAGA
AATATTGTTA AGAAGATAGA AGAACAATTA GAGTATCCAG GTCAAATCAA GATAAATGTA
ATAAGAGAAA CCCGTGCAGT TGACTATGCT AAATAA
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| Protein sequence | MVVGILIGII ILGVVGFIQY TLIQKASKNR VESLEKEASL TLEEAKREAE STKKEAILEA
KEEVHKLRAD LDKETRDRRN EIQRFERRLI QREESLDKKG EMLEKREDSI NKKSIEIQEL
EERVQNLYGE QRAELERISN LSSEDARTLL LDEVRREIKH ESAMLIKELE TKAKEEADKK
SREIITTAIQ RCAADHVSET TVHVVALPND EMKGRIIGRE GRNIRTLETL TGVDLIIDDT
PEAVILSSFD PIRREVARIA LEKLIVDGRI HPARIEEMVE RAIKDVENDI KEEGEQATFE
TGVHGLHPEI IKLLGRLKYR TSYGQNVLKH SIEVSYLAGL MASELGLDVN LARRAGLLHD
IGKGVDQEYE GPHAVIGGEL AKKYHESPAV VNAIAAHHGD TEMQTLEAVL VQAADAISAA
RPGARRETLE AYIKRLEKLE EIATSYEGVE KSYAIQAGRE IRIMVKPDQV DDAGAIEMAR
NIVKKIEEQL EYPGQIKINV IRETRAVDYA K
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