Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1858 |
Symbol | |
ID | 4203838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2094798 |
End bp | 2095604 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 24% |
IMG OID | 638082728 |
Product | GTP pyrophosphokinase-like protein |
Protein accession | YP_696292 |
Protein GI | 110800709 |
COG category | [S] Function unknown |
COG ID | [COG2357] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000143095 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAGTT TAAATAAAGA AGTTTTTCTT AAGAAATATC CTCATGTAGA AGAATATATA GAGAAAAATA AAATTGAATT TGAAGATTTA CAAAGGATAT ATAAGGATTT TGTAAAGTTT GAGGGTTCTT ATTATAATCA AGCTGATTTT ATAGCCAATA TACTTCGTTC TAATGAAAAT GTTCATTCTG TTAAATCAAG GATAAAAAAT CCAGATAGAT TAATAGAAAA AATAATACGA AAAACAGAAG ATAGAAAAGA AAAGTATGGT GAAGATTTTT ATTTTAATGA GGATAACTAT AAAAATGAAA TAACTGACTT AATAGGAATA AGGGTTTTAC ATATATTTAA GGATCAATGG AAGGATATAC ATGATTTCAT AATAAAGACT TGGAATGTAA TTGAAATAAC AGCAAATATA AGAGATGGAG ATGATAGAAG TATATTTGAT AATCTTGGTA TTGAAGTTAT ATCAAGACAA TCAGGATATA GATCAGTTCA TTATCTTGTA GAATGTTATC CTACTAACCA AAAGGTTATT GCAGAAATTC AAGTAAGAAC TATTTTTGAG GAAGGGTATG GAGAAATTGA TCATAGACTA AGATATTCTC ATAATGAAAT TCCAGAAATA TTAAAATCTA ATCTTTTACT TTTTAATAGA ATTGTAGGAA GTGCAGATGA AATGGCTTCC TTAATAAATA TGTTAAATAA TAATTTAGAT GATAAAGACA ATTATTATGA AACTAAATTA AAAGAAAAAG ATGAAGAAAT AAGAAAATTA AAAGAAGAAA TTGAAAAGTT AAAATAA
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Protein sequence | MRSLNKEVFL KKYPHVEEYI EKNKIEFEDL QRIYKDFVKF EGSYYNQADF IANILRSNEN VHSVKSRIKN PDRLIEKIIR KTEDRKEKYG EDFYFNEDNY KNEITDLIGI RVLHIFKDQW KDIHDFIIKT WNVIEITANI RDGDDRSIFD NLGIEVISRQ SGYRSVHYLV ECYPTNQKVI AEIQVRTIFE EGYGEIDHRL RYSHNEIPEI LKSNLLLFNR IVGSADEMAS LINMLNNNLD DKDNYYETKL KEKDEEIRKL KEEIEKLK
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