| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1855 |
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| Symbol | thiF |
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| ID | 4202099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2091413 |
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| End bp | 2092012 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638082725 |
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| Product | thiamine biosynthesis protein ThiF |
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| Protein accession | YP_696289 |
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| Protein GI | 110800335 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 |
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| TIGRFAM ID | [TIGR02354] thiamine biosynthesis protein ThiF, family 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTATCTA GGCATACACC AGGTATTCAT GAAAAACTAA AAAGAATTAA GGTTTTAATA
GCTGGATGTG GAGGCCTTGG ATCTAATATT GCTATTTCCT TAGGAAGAAT AGGGGTTGGA
AGTATAAGTT TAGTAGACTT TGATATAGTG GAACCTTCTA ATTTAAATAG GCAACAGTAT
TATATTGAGG ATATTGGAGA ATTTAAAGTA ACTGCTTTAA AAAGAAACTT AATTAGAATA
AATCCTTTTA TAAAAATAGA AGCTTTAAAT CTTAAGCTTT CTGAAGATAA TATGGGTATT
TTACAAGGAG CTGACATAAT AATAGAAGCC TTTGATAATC CAGATTATAA AGCCTTATTA
GCTAATTATG TTTTAAGTAA TATGAAGGAC AAATTTTTGA TTTCCTCTTC AGGAATGGCT
GGTTTTTATG ATTCAAATTT AATAAAAACA AAGCAAATAA CAGATAAGTT TTATATTTGT
GGAGATTTGG TAAATGAAGC TAAGGAAGGC TGTGGATTAA TGGCTCCTAG GGTGGCTATA
TGTGCAAATC ACATGGCTAA TTTAGTTATA GATATAGCTG TTAACAAAAT AGAATTTTAA
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| Protein sequence | MVSRHTPGIH EKLKRIKVLI AGCGGLGSNI AISLGRIGVG SISLVDFDIV EPSNLNRQQY
YIEDIGEFKV TALKRNLIRI NPFIKIEALN LKLSEDNMGI LQGADIIIEA FDNPDYKALL
ANYVLSNMKD KFLISSSGMA GFYDSNLIKT KQITDKFYIC GDLVNEAKEG CGLMAPRVAI
CANHMANLVI DIAVNKIEF
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