Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1839 |
Symbol | |
ID | 4202241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2073663 |
End bp | 2076857 |
Gene Length | 3195 bp |
Protein Length | 1064 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638082709 |
Product | putative pullulanase |
Protein accession | YP_696273 |
Protein GI | 110800805 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02104] pullulanase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGATT CTGTAAAAAG AAAACTTGTT TGTTATGATG ATAATGAATA CTACATAGAG ATTAGTCCTT TAACTAATAC CATAAGAGCA ACCTTATGTT GTAAGGGGGC AATTGAGGCT TATTTAGTTG GAGATTTTAA CAATTGGGAA AAAAGCGAAA ATTTTAAGCT TAATTGGGGC TTGGATACTA ATGATGGTAG AGTAAAAATG ATTAAAGATA TTACCTTTCC TTGTGGACTA AAGAAGGGTG AATATAAGTA TGGATATATA ATTATTACTC TAGATGGAAA AGAAATATAT GTAGATAACT TAAATGAAGA GAAAAATGAT TTTTATTTCC TTTGGGAGCC CTTTGAAGAA TCCTTAGAAA TAAAAAGTTC AAGAGATTTT ATATCTACTA GATACCCAGT TGAATTAATA GCTGTTAAAA ATTCATTTTA TGGAAATATA ACCATTGAAG ATGCGGTTCT TTCCATAGAG AACTCTTTAA AGGGAGTAAT TTTAGAAAAT GGTTTTTTAA AGATTAATGA GGAAGTAGCC CCTGGCACTA AAATTATAGT AAAGGCCTAT GATTCTTTAA ATGACATGAC AGCTTATAAG GAAATTGAGG TTAGAGAAGA AGGGGAAAAA GGGACTTTTG TACAATTTTT AAAGAATGAT GGATTATATT ATGGAGAAAA TTTCAGCTGG AATATTTGGG GCTTTGGAAA AAATAGCTCA GGTAAAGAAT TTAATTTAAA TATTAAAACA GATTTAGGTG TAGGAACTTT TGTAGATGAA GAGAAATTTA TAGTAAGAAA GAGAACTTGG GGATGTAACT GGGTAAATGA TTGGAATGAG CAGACATATA CTTTTTATTT AGGTAAGGAA GATAGAAATT TATTTTGCAT ATATGAAAAT AATAAGATAT TAACTTCTTT AAAGACTGCC ATAGAAGAAA CTACCCCTAA AATACAAGTT GCCTTAATGG ATCATAAAAA TACTATAAAA GCATATCTTT CTCATAAGCC TTTAATTGGA GTTAAGTATG GATTGTATAT AAACGGAATA AAGGCTAAGG GAGTTTCAAC CCTAGTTAGA GAAAATGAAA AAGAAGTTTT AATAACTAAT CTTCCAAGTG ATATAGATCC ATCAGATTTA TTAGAAGTAA GAGCTTCTAG TATGTTTTCA AGTTGCAAAG TAATAGTAAG AGATTATTTA AATGATTATT ATTATGGAGG AAATGACCTA GGTGTAAGAT TTAGTGAAGA AAATATAAGC TTAAGGTTGT GGGCACCTAC TGCTAAAAAA GTAGAATTGT TAATATATGA AGATTATAAA TCTCTAAGGG AAAATCCTTT AAGAAAATAT GATATGAATA GGGAAAAAGA AAATGGAACT CATTTAATTA AAGTGCAAAG AAAAGAAAAT GAGGGTAAAT ATTATTTATA CAGATTATAT TTTAATGATT TAAGCAAAGA AGGTAAACAT GTAAATAAGA TAACCTATGC TGTAGATCCC TATGCTGTTT CAGTAGGAGT AAATGGAGAA AAGGGAGCTT TAGTAGATTT ATTTAGTAAA GAGTGTGTAC CAGAAGGATG GAATAAGTAT AATAAACCTA AGTTAATAAA TAAAGAAGAT TCAATAATTT ATGAGATGCA CATTAGAGAT TTTACCATAA ATGAAAATTC AGGAGTTTCT GAAAGCTTAA GAGGAAAATT TTTAGGGGCA GTTGAAGAGG GAACTTTCTA TATTAATAAA GAAAATGGAA ATAAGGTTAA GACAGGATTA GATCATTTAA AGGAATTAGG GATAACCCAT GTTCACTTGC TTCCAGTCTT TGATTTTTCT TCTGTTAATG AAGAAATAAC CAAGGATGAA AATAATAGGA ATTGGGGATA TGATCCTAAA AACTTTAATG CCATAGAAGG AAGTTATTCA ACAGACCCAT ATACACCTTC AAGAAGAATA ATAGAGTTTA GAGAGATGAT AAAAAAGTTT CATGATAATG GAATAAGAGT TGTATTAGAC ATGGTTTATA ATCATATGTA TGAAACTAGT AATATGGATA ATATAGTTCC TTTATATTAC TTTAGAAGTG ATAAATTAGG AAAATATACA AATGGATCTG GCTGTGGAAA TGAAATGGCC TCTGAAAAGC CTATGGTTAG GAAATTTATT TTAGATTCAA TATTACATTG GATTAAAAAT TATCATATAG ATGGATTAAG ATTTGACTTA ATGGAACTTA TAGACTTAGA TACAATGAAG GAAATAGTGA AGAGAAGTGA AGAGATTGAT GAAAAAATAC TTATTTATGG GGAGCCTTGG AAAGGTGGAG ATTCTCCTTT AAGTAATGGA ACTTACAAGG GAAGTCAAAA AGGTCTTGGA TTTTCCATAT TTAATGATGA TTTTAGAAAT GCTCTAAGAG GAAATAATGA CCCATCTAAT GGATTTATAA ATGGAGAACA GCACAATAAA AATAAAGCTT GGCAAGTTAT AGAAGGAATT AAGGGGTCCA TAAATTCAAT AACCTATAAA CCTATGGAAA GTATAAATTA TTTAGAATCA CATGATAACT ATACCCTATG GGATCAAATA GTAAAAAGTC AAAATCATAG TGTGGAAAAG GGACATTATA GAGATTTTAA TGAAGAAAAT ATATTAGATA ATTTTTATGT TAAGGAAGAT TTGCTTGGAG CTTCTATATT ATTTACTTCT CAAGGAATTC CCTTTATTCA ATCTGGAGCT GAAATTTTAA GATCTAAAGA TGGAGATCAT AATAGCTATA AGAGTCCAGA CAGTATAAAT GCTTTAAATT GGGCAGAGAA AGAAAAGTAT ATTGATGTTT TCAATTATTA TAAAGACTTA ATAAGTTTAA GGAAAAATCA CAGTGCTTTT AGAATGAAAA ACCCAGAGGA TATAATAGAA AATTTAGAAG TTTATTTTTA TGACAATAAT GATACTAGCG GAGTAATAAT AGCTCACTAT AAAAATAATG CTAATGAAGA TTTATGGAAA GATATAGTGG TAATATATAA TGGAACTACC ATTGATGATT ATAATGTAAT TTCTTCTATG CCTAAATCAA GTAATGGCTT TTGGAATATT GCAGTTAAAA ATGGGGGTGT AAATCAGTTT GGTATAGAAA GAGTAAGTGA GGATGAAATT CCTAAAATAA AATCTCATTC TATGATGATC CTTTATGATG AATAA
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Protein sequence | MFDSVKRKLV CYDDNEYYIE ISPLTNTIRA TLCCKGAIEA YLVGDFNNWE KSENFKLNWG LDTNDGRVKM IKDITFPCGL KKGEYKYGYI IITLDGKEIY VDNLNEEKND FYFLWEPFEE SLEIKSSRDF ISTRYPVELI AVKNSFYGNI TIEDAVLSIE NSLKGVILEN GFLKINEEVA PGTKIIVKAY DSLNDMTAYK EIEVREEGEK GTFVQFLKND GLYYGENFSW NIWGFGKNSS GKEFNLNIKT DLGVGTFVDE EKFIVRKRTW GCNWVNDWNE QTYTFYLGKE DRNLFCIYEN NKILTSLKTA IEETTPKIQV ALMDHKNTIK AYLSHKPLIG VKYGLYINGI KAKGVSTLVR ENEKEVLITN LPSDIDPSDL LEVRASSMFS SCKVIVRDYL NDYYYGGNDL GVRFSEENIS LRLWAPTAKK VELLIYEDYK SLRENPLRKY DMNREKENGT HLIKVQRKEN EGKYYLYRLY FNDLSKEGKH VNKITYAVDP YAVSVGVNGE KGALVDLFSK ECVPEGWNKY NKPKLINKED SIIYEMHIRD FTINENSGVS ESLRGKFLGA VEEGTFYINK ENGNKVKTGL DHLKELGITH VHLLPVFDFS SVNEEITKDE NNRNWGYDPK NFNAIEGSYS TDPYTPSRRI IEFREMIKKF HDNGIRVVLD MVYNHMYETS NMDNIVPLYY FRSDKLGKYT NGSGCGNEMA SEKPMVRKFI LDSILHWIKN YHIDGLRFDL MELIDLDTMK EIVKRSEEID EKILIYGEPW KGGDSPLSNG TYKGSQKGLG FSIFNDDFRN ALRGNNDPSN GFINGEQHNK NKAWQVIEGI KGSINSITYK PMESINYLES HDNYTLWDQI VKSQNHSVEK GHYRDFNEEN ILDNFYVKED LLGASILFTS QGIPFIQSGA EILRSKDGDH NSYKSPDSIN ALNWAEKEKY IDVFNYYKDL ISLRKNHSAF RMKNPEDIIE NLEVYFYDNN DTSGVIIAHY KNNANEDLWK DIVVIYNGTT IDDYNVISSM PKSSNGFWNI AVKNGGVNQF GIERVSEDEI PKIKSHSMMI LYDE
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