Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1834 |
Symbol | |
ID | 4203835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2069241 |
End bp | 2070062 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 638082704 |
Product | putative cobalt ABC transporter, permease protein |
Protein accession | YP_696268 |
Protein GI | 110800706 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.983784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTACAT ATATAAAAAA GGATTCTCCT ATTGATAAAC TTACTGGAGC AACTAAGCTT ATTTGCTTTA TATTTTGGAC ATTAGCTGCC ATGCTTACAT ATGATACAAG AGTATTAATT GGCATGCTTA TATTTAGTTT AATTATATTT AAGGTCTCAA AAATAGAGTT TAAAGAAGTT TCTTTTATAG TTTATTTTAT ATTATTCTTT TTACTTTTAA ATGATTTAGC CATTTTTATA TTTTCACCTT ATGAAGGAGT TAATATATAT GGAACAAGAC ATGATATATT TCATATAGTT GGACCATACA CACTAACATG GGAACAATTA TTTTATGAGT TTAACGTTAC ATTAAAATAT TTATCAGTTA TACCTATGGC ACTTTTATTT ATACTTGCAA CCAATCCAAG TGAATTTGCT GCATCTTTAA ATAAAATAGG TGTTAGTTAC AAAATATCAT ATTCTGTATC AATAGCTTTA AGATACATAC CAGATATTCA AAGGGAGTAT CATGATATAT CCTTTGCTCA ACAAGCAAGA GGAATTGATA TGTCTAAAAA AGAAAAGTTA GGAAAAAGAA TAAAAAATAT ATCTTCAGTT TTAATGCCAC TTATTTTTTC AAGTTTAGAT AGAATAGAAA ATATAAGTAC AGCAATGGAA CTTAGAGCCT TTGGAAAGAA TAAAAAAAGA ACTTGGTACA ATGAAAGAAA ATTTTCTAAG GGTGATTACT TAGCTATTAT TGTAGTTATC TTAATATTTG CTTTATCATT ATACTTTACA TTTAATAATG GAAGTAGATT TTATAATCCC TTTGTAAAAT AG
|
Protein sequence | MLTYIKKDSP IDKLTGATKL ICFIFWTLAA MLTYDTRVLI GMLIFSLIIF KVSKIEFKEV SFIVYFILFF LLLNDLAIFI FSPYEGVNIY GTRHDIFHIV GPYTLTWEQL FYEFNVTLKY LSVIPMALLF ILATNPSEFA ASLNKIGVSY KISYSVSIAL RYIPDIQREY HDISFAQQAR GIDMSKKEKL GKRIKNISSV LMPLIFSSLD RIENISTAME LRAFGKNKKR TWYNERKFSK GDYLAIIVVI LIFALSLYFT FNNGSRFYNP FVK
|
| |