| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1821 |
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| Symbol | |
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| ID | 4203467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2053123 |
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| End bp | 2053953 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638082691 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_696255 |
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| Protein GI | 110801386 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0131582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTATA AATTAGTTTG TATAGATATG GATGGTACGC TTTTAGATTC TCATCATAAA
GTTAGTGAAA GAAATAAAGA GGCTTTAAAG AAAGCCATTG AAAAAGGAGT ACATATTGCC
ATATCAACAG GAAGGGTTTT TCCGTCAGCT AGAATATATG GGAATATAAT AGGAGTAAAT
GCACCATTAA TTTGTTCAAA TGGTTCATAT ATAAAGGATA AAAATACTGA TGAGGTAATA
TTTAAATCTA CACTAGACAG GGAAACTTAC TTTAAAATAT GTGATATTAT AAATAAATAT
AAGTTTTTAG CTTATGTAGA CTCTACAGAT GGACTAATAG CAGATACAGA TATTCCAGAG
GATGATAGTC ATAGGCTTAT GAATAGCTGG GTAGATGAGA AAGAAAAAAT AAAATTCTAC
AATTGCGATG ATTTAAGAGA TGCTTATGAT GAACATGGAG AAGATATATT AAAGTTCATA
ATAATAAAAC AAGAAGGTGG ACCTAATATA GAAGAAGCTA AGGAGGAATT TGAAGCTTTA
GAAGGAGTAG ATTTAGTTTA TGCTTCTTGG GGTGGATGTA TAGAGATCAT GAAAAAAGGA
ACTTCAAAGG GAAGTGCAGT TAAAGCCCTT GCAGATAAAT TAGGAATAAG CCTAGAAGAG
GTGATATGCA TTGGTGATAG TGGAAATGAT GTATCTATGC TAGAAGAGGC AGGATTATCT
GTAGTAATGG GAAATGCACC AGACTTTATT AAGGAATATG GAGATTATAT AACAGATACA
AATGAAAATG ATGGTGTTGC TAAGGCTATA GAGAAGTTTA TATTGGAGTA A
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| Protein sequence | MNYKLVCIDM DGTLLDSHHK VSERNKEALK KAIEKGVHIA ISTGRVFPSA RIYGNIIGVN
APLICSNGSY IKDKNTDEVI FKSTLDRETY FKICDIINKY KFLAYVDSTD GLIADTDIPE
DDSHRLMNSW VDEKEKIKFY NCDDLRDAYD EHGEDILKFI IIKQEGGPNI EEAKEEFEAL
EGVDLVYASW GGCIEIMKKG TSKGSAVKAL ADKLGISLEE VICIGDSGND VSMLEEAGLS
VVMGNAPDFI KEYGDYITDT NENDGVAKAI EKFILE
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