| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1810 |
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| Symbol | |
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| ID | 4203281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 2043346 |
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| End bp | 2044845 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 638082680 |
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| Product | phytoene dehydrogenase family protein |
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| Protein accession | YP_696244 |
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| Protein GI | 110801106 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.149228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTCCAA ATAAAAAAGC TATAATAGTT GGAGCTGGAA TAGGTGGATT AGCTACTGCT
GTTCGCCTTC TTATTAATAA TTTTGAAGTA GATATTTTTG AAAAAAACTC TAAGATAGGT
GGAAAAGTAA ATTTAATTGA ATACAAAGAT TTTAAGATAG ATTCTTCTGC TTCAATATTT
ATGCTCCCTA AACCCTATTT AGAAGTATTT AAATATGCAA AAAAAGACCC TAAAGACTAT
ATAGAGCTTG TAGAATTAAA TACTTTATAT AAAGTGTTTA ATGATGAAGG AGATAGTTTT
AATATTTATT CAGACTTTCT AAAAACTACA GAGTCCTTAG AAAAGGTATT TAATGATGAA
AGTTCAAATT ATTATAAATA TATATCTGAC TCATATAGAA GATATCTTTT AGTAGAAAAA
TACTTTTTAA ACAGAAGTTT TTTCACCTTA AATTATTGGA GATATTTTAA ATCTTTACCT
GAACTAATTA AAATACATCC TTTTAAAAAT TGTTATAAAA CCATTGAAGA ATATATAAGT
AATGAATATT TAAAAAACTT ATTAGCTTTT CAATGCATGT ATATTGGGGA GTCTCCCCTT
AAAAGTTCTA ATGTTTTTAA TTTAATTCCA TCAACCACTC AAATATATGG ATTATATTAT
ATTAAAGGTG GAATGTACTC TTATGTGAAG GCTTTAGAAA AATTAATCCT AGAACTTGGT
GGTAAAATAC ATCTTAACTC AAATGTAACT AATATACTTA TGGAAAAGAA TGTAGCAATT
GGAGCAAAAA TAAACCACGA AAATATATTT TCTGATTTAA TTGTTTGTAA TTCAGATTTT
ACTTATACCA TACAAAATTT ACTTCCTAGA AGTACATTTA AAAATAAAAT TTCTAGGCGA
AAACAAAATA ATTTATCCTT TTCTTGCTCT ACATTTATAC TACATTTATT TCTTAAGAAA
AAATATAAAA ATTTAGATGT ACATAATATA GTACTTAATT TAAATAAGAA AGAAGTTTTA
TTAGCTCCCT TTATAGATGG GCCCTTGCCA AAGGAATATA TATATTATAT CTATTGCCCA
AGCTCAATAG ATACTTCATT AACTCCTGAG GATTGTGAAT GCATTAATAT AACAGTACGT
GTTCCAAACT TAAAAAAATA TAAATCAAAA TGGACTGAAT CTACAATTGT TTCTTTGAGA
AACAAAATCT TGTATGACCT AAGTAAAATT AAAGGTTTAG AAGATATAAA AGAAAATATA
ATTTACGAAA GCTATACAAC GCCTATGACC TTAAAAAATG ATTTTAATTG CTTTTTTGGT
GCAGCTTTTG GTCTTAATCA TAATTTGCTA CAAACAACTA TTTTTAGACC TCAGGCAAAA
ATAAAAAAAC TAAAGAATAT ATATTTTGTA GGTGATTCAG TACATCCTGG CTCTGGAATA
TCAATGTCCT TAATCTCAGC TAAGCTATGC TGTGAAAAAA TAATATCAGA TTTTAGCTAA
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| Protein sequence | MSPNKKAIIV GAGIGGLATA VRLLINNFEV DIFEKNSKIG GKVNLIEYKD FKIDSSASIF
MLPKPYLEVF KYAKKDPKDY IELVELNTLY KVFNDEGDSF NIYSDFLKTT ESLEKVFNDE
SSNYYKYISD SYRRYLLVEK YFLNRSFFTL NYWRYFKSLP ELIKIHPFKN CYKTIEEYIS
NEYLKNLLAF QCMYIGESPL KSSNVFNLIP STTQIYGLYY IKGGMYSYVK ALEKLILELG
GKIHLNSNVT NILMEKNVAI GAKINHENIF SDLIVCNSDF TYTIQNLLPR STFKNKISRR
KQNNLSFSCS TFILHLFLKK KYKNLDVHNI VLNLNKKEVL LAPFIDGPLP KEYIYYIYCP
SSIDTSLTPE DCECINITVR VPNLKKYKSK WTESTIVSLR NKILYDLSKI KGLEDIKENI
IYESYTTPMT LKNDFNCFFG AAFGLNHNLL QTTIFRPQAK IKKLKNIYFV GDSVHPGSGI
SMSLISAKLC CEKIISDFS
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