Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1788 |
Symbol | |
ID | 4202717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2015953 |
End bp | 2016744 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638082660 |
Product | anaerobic sulfite reductase subunit B |
Protein accession | YP_696224 |
Protein GI | 110798571 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases |
TIGRFAM ID | [TIGR02911] sulfite reductase, subunit B |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.920416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATA TTTTAACACC TAAATCATGT GAAATAATAG ACATAGTTAA GGAAACTGAC AAAGAATGGA CTTTTAGAAT AGCTTCTGAT GTTGTTCCAG AACATGGTCA GTTTTTAGAA TTATCTCTTC CTAAGGTTGG AGAAGCACCT ATTTCTGTTA GTGGATTTGG ACCAGGGTAC TTAGATTTTA CAATAAGAGC AGTAGGTAAA GTTACTGATG AAATATTTAA ACTAAAGCCA GGAGATAAGA TTTCTTTAAG AGGAGCTTAT GGAAAAGGTT GGCCTGTAGA ACAATTTAAA AATAAAAATG TAATAATAGT AGCTGGGGGT ACAGGAGTAG CACCAGTTAG AAGTTTAATA AATAAATTTT ATGATGAACC AAACTATGTT GAAACTTTAA GTTTAGTATT TGGATTTAAA AATTCAGAAG GAATACTTTT TAAAAATGAC TTAGATAGAT GGAATGAAAA ATTCAATACT ATTTATACTT TAGATAATGA TACAAAAGAA GGATGGGAAA CTGGACTTGT AACAGTTCAT TTAAATAAAT TACCTCTAGA AAGTTTTGGA GATAACTATG AGGTTATCAT AGTTGGACCT CCTGTAATGA TGCATTTTAC AGCTTTAGAA TTCTTAAAAC TTGGAGTTCC AGAAGATAAG ATATGGGTTT CATTTGAAAG AAAAATGTCA TGTGCAGTAG GAAAATGTGG ACATTGTAGA ATAAATGAAA CATATGTATG TCTTGAAGGA CCTGTATTTA ACTATACAAA AGCAAAGACA TTATTAGATT AG
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Protein sequence | MENILTPKSC EIIDIVKETD KEWTFRIASD VVPEHGQFLE LSLPKVGEAP ISVSGFGPGY LDFTIRAVGK VTDEIFKLKP GDKISLRGAY GKGWPVEQFK NKNVIIVAGG TGVAPVRSLI NKFYDEPNYV ETLSLVFGFK NSEGILFKND LDRWNEKFNT IYTLDNDTKE GWETGLVTVH LNKLPLESFG DNYEVIIVGP PVMMHFTALE FLKLGVPEDK IWVSFERKMS CAVGKCGHCR INETYVCLEG PVFNYTKAKT LLD
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