Gene CPF_1786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1786 
Symbol 
ID4202307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp2013752 
End bp2014378 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content26% 
IMG OID638082658 
Producthypothetical protein 
Protein accessionYP_696222 
Protein GI110798668 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.429881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAATA AAATAATAAA ATCATATTGG GGTGTTGAAT TAAGTCCAAG ATTTATTGAT 
GCTGGAAGTA AAAAGCTTTG CATAATATTA CCTGGAATAG GATATTGTTT AGATAGATCT 
TACTTAGATT ATTCTAAGCA ATTAGCAAAA GAAATAGGAT ATGATGTTCT AGAAATAGAA 
TATGGATATC AAATAAACAG AAGCGAATTT AATATTGAAA AAGAGTTTAG CATAATGGTT 
TCTGAGTCAT TAGAAGTTAT AGACAATGCC ATAGAAAAAG AATATGAAGA GATTTTAATA 
ATAGGAAAAA GTATTGGAAC AAGTGTACAA TCCTTCTTAA ATAAAGATTT AAGTGGAAGA 
TTTAAAAATA TAAGAAATAT ATATATAAGC CCAATAAATA AGACTTTAGA TGAGTTTAAC 
ATAGAATCTA ATTCTTTAGT TATAACAGGA GATAAAGATC CATTATTAAG TATAGCTCAT 
AGAGTAGAGA TAGAAAAAAG AGAGGATATA GAAAGTTTTA TAATAGAAGG TGCAAATCAT 
GCTCTTGATA TAGAGGGAAA TGTTATGAAC ACCGTTGATG CTTTAAAAGA GTCTTTAGAA 
ATAGAAAAAG ATTTTATATT AAAATAA
 
Protein sequence
MSNKIIKSYW GVELSPRFID AGSKKLCIIL PGIGYCLDRS YLDYSKQLAK EIGYDVLEIE 
YGYQINRSEF NIEKEFSIMV SESLEVIDNA IEKEYEEILI IGKSIGTSVQ SFLNKDLSGR 
FKNIRNIYIS PINKTLDEFN IESNSLVITG DKDPLLSIAH RVEIEKREDI ESFIIEGANH 
ALDIEGNVMN TVDALKESLE IEKDFILK