Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1759 |
Symbol | |
ID | 4201223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1979260 |
End bp | 1980975 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638082631 |
Product | BNR/Asp-box repeat-containing protein |
Protein accession | YP_696195 |
Protein GI | 110799218 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00340531 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGGGTA AAAAAATATG TAAATCCTTA GAGGGAGATG GAGTTTTAAG TTATTCTGTA AAAGAAAGAT TTTTTAGTGA TTTAAAAGAA TTTGTAGATA TAAGTGAAGA TATTAATAAG ATTAAAAATC TAAAGGAATT TACTATTGTT ATAAAATTTA GAAGCAATAT AAATAGTGGG GATAAAACTT TATTTAGCAT ATTAAATTCA ACAAAAAACT CTAGTGAATT GGTTTTAAGA TTAAGTGATG GAAAGTTAAA TCTTTATATA AGGGAAAATC ATAATTTACT TTGTCATATA AAATCAGCAA AAAAATATGG TGATAATTCT TGGCACATAG TAATTATGTC CTTAGGAGAT TGGGGAATAA AACTATATGT TGATGGTAAT GAAGTAGGGT ATTTAAAGAG TCCTATTAAT CTTAGTATGA TTACAGAACT TAATTCTATG AATATAGGAA GAGCTTTAGA TAATAAAGGA GAAGGTATAA GGCATTTTCA TGGGGATATA GATTACTTAG ATTTATATGA CAGATGCTTA AGTAGAGAAG AAGTAAAGGA ATTAAGTAAA CAAGAAGTAA AAATTGGATA TGATATTCCT TTTATAGATT TATCAAAGGA TAAGGATAGA CAGGTTTTAG TTGATAAAGA AGAAGGAGTT TACTTAGGAC ATCCATCAAC AGTTCTAATG GATGATAAGA AAACCATGTA TGTTGTTTAT CCAAAGGGAC ATGGTGTAGG ACCAATAGTT CTTAAGAAAA GCGAGGATTC AGGATTAACT TGGAGTGAAA GATTAGAAAC ACCAGTAAGC TGGAATAATA GTGAGGAAAC TCCTATTATA TATAAAATAA AGAAGCCAAA TGGTATAAGT AGAATTGAAA TGATATCTGG AATGCCAAGA GGTGGAGAAA AGGGATTTAG AACCTCATAT TCAGATGACT GTGGAAAAAC ATGGAGTGAA TTTAAACATT ATTTTCCTAC AGGTAAATAT GGAGGAATAG TTGCTCACGC TAGTTTAACT AGGCTTAAGA ATAAAAAGGG AGATATGGAT AATAAGTGGC TTGGAATTTT TCATGATCTT AATTATAATA ACTGGAAAAC TTATTTAAGC TTTGATGAAA GTGGAGAAGA GGTTTGGACA GAGCCAGTTA GGCTTTTAGA AGAGCATAAC TTAATAGAAA AGACTGCACA GTTATGTGAA ATTGAAGTAT TACGTTCTCC TGATGGAAAT CAATTAGCTT TAATAGCTAG ATCACAAGGT AAGAAAAACA ATTCTATGAT TGCATTTTCC AATGATGAAG GTGAAACTTG GACTGAGCCT TTAGAACTTC AAGGAGCTTT AATGGGAGAA AGACATAAAG CAACTTATGA TCCTATATCA GGAAGACTAC TAATAACTTT TAGAGAAATA ATAAGAGATT CAAAGAAAAC AGGAGATAAA AATGACTGGG TAGCTGGTCA CTGGGTTGCT TGGGTAGGAA CCTATGATGA TTTAGTTCAT AATAGAGAAG GGCAATATAG AATAAGACTT ATGGAAGATT TTACTCCTAC TGAAAAATCA GGAGATTGTG GATATGCAGG AAACGAAGTT TTAGATGATG GAACTTTTGT ATTAACTTCC TATGGCTATT GGGAAAAAGA TTATAACAAG CCATATATAA AAAGCTTAAG AGTAACTTTA AAGGAAATTG ATGAAATAGT TAGAGAGATG GTATAG
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Protein sequence | MRGKKICKSL EGDGVLSYSV KERFFSDLKE FVDISEDINK IKNLKEFTIV IKFRSNINSG DKTLFSILNS TKNSSELVLR LSDGKLNLYI RENHNLLCHI KSAKKYGDNS WHIVIMSLGD WGIKLYVDGN EVGYLKSPIN LSMITELNSM NIGRALDNKG EGIRHFHGDI DYLDLYDRCL SREEVKELSK QEVKIGYDIP FIDLSKDKDR QVLVDKEEGV YLGHPSTVLM DDKKTMYVVY PKGHGVGPIV LKKSEDSGLT WSERLETPVS WNNSEETPII YKIKKPNGIS RIEMISGMPR GGEKGFRTSY SDDCGKTWSE FKHYFPTGKY GGIVAHASLT RLKNKKGDMD NKWLGIFHDL NYNNWKTYLS FDESGEEVWT EPVRLLEEHN LIEKTAQLCE IEVLRSPDGN QLALIARSQG KKNNSMIAFS NDEGETWTEP LELQGALMGE RHKATYDPIS GRLLITFREI IRDSKKTGDK NDWVAGHWVA WVGTYDDLVH NREGQYRIRL MEDFTPTEKS GDCGYAGNEV LDDGTFVLTS YGYWEKDYNK PYIKSLRVTL KEIDEIVREM V
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