| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1751 |
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| Symbol | virS |
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| ID | 4203452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1969661 |
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| End bp | 1970983 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 22% |
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| IMG OID | 638082623 |
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| Product | sensor histidine kinase VirS |
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| Protein accession | YP_696187 |
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| Protein GI | 110801372 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2972] Predicted signal transduction protein with a C-terminal ATPase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0035916 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAATGA ATCAAATGTT TTGGGACTTC ATGGAGAATG CTTCCATGAT TATAGAATGG
GTAAGTTTTT ATTTGATTAT AAGTCAATTT AGCCCTAAGA AAAGAAAAAA TAAACAAGAA
GTTTATTCCT TCATTGTAAT AATAATTTTT TCTATCTTAT TAAAAGTTCT AAATGTATAT
CCAAATGAAA GAATAGTAAT ATGTTTTTTT ATAGGTTTAA TATATTATAA ATTTAATTTT
AGAGTAAACA ATATAAAATG TATTATGATC TCATTAATAT TTTGGTTATT TATGCTTACA
GTAGAAGCTC TATCTATTTC TTTTATAGTA AAAATAAATA GTTTAGTTAA TGTATCGGAG
CTTTTAGGTA AAAATATCTA TAGGATGGAA ACTATGATAT TATCAAAGGT TATTTTAATA
TCTTTAATAA TGGTTGTTAG ATGTTTAAAG TTTCGTGTAG ATATTGGAAA GGGAGATTTT
ATTTATATTC TTACTCCTAT AGCTACTAAT ATAATTATTA TTTTAGTTAT ATTTGGATAT
GCCTTTAAAG GGGGACGAGA AGGTTTTGGA GATAATGTAT CCATATTCTT TGTTTCAATA
TTATTGTTAT TATCTAATAT GTCCTTAATG TTTATTGTTA GTAAAATAAT AAAAAATAAC
AAATTAAAAT TAGAAAATGA ATTTATAAAG GACAAGTTAG AAATGGAATA TAAATATTAT
TCTAATTTAA AAGACAATCA AGAAAAAGTA AAGAGACTTT ATCATGATAT TAAAAATCAC
ATAGCCTGTA TTGAAGGAAA TAACAAAGAA ACAGGTATAA GAAAAAAATA TATAGATAGT
CTTAATTCAG AAATAGACAA GCTAAACTTA GGATTTAATA CTGGAAATGA AGTGTTAGAT
GTAATATTAA ATAATAAGAG AGAAAAATGT ATGGAAAATA ATATTTCTTT AAAGGTTTTT
ATAGATTTTT CAAAGGTTAA TTTTATTGAG TACTTTGATA TCTGCACAAT TTTTTCTAAT
TGCATTGATA ATGCAATTGA AGCTTGTAAA AAGATTAAAG ATAATAATAG ATACATAAGT
TTAAAAGGTA ATTGTGTAAA TAATTTTTAT GTTATTAAAA TCGAGAATTC TAAAACAAAT
AAAATAAAAA AGTTAAATGG AGATTTTTTA ACTGATAAAA AAGATAAGTT TTTACATGGT
ATTGGCCTTA AAAATATAAG ACTAGCTTTA GAAAAATATA ATGGAGAAAT AATTATAGAA
CCTTTAGATG ACAAATTCAT ATTAAAAATG CTCATTCCTA TAAATCAAGA AAAAGAAGCC
TAG
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| Protein sequence | MLMNQMFWDF MENASMIIEW VSFYLIISQF SPKKRKNKQE VYSFIVIIIF SILLKVLNVY
PNERIVICFF IGLIYYKFNF RVNNIKCIMI SLIFWLFMLT VEALSISFIV KINSLVNVSE
LLGKNIYRME TMILSKVILI SLIMVVRCLK FRVDIGKGDF IYILTPIATN IIIILVIFGY
AFKGGREGFG DNVSIFFVSI LLLLSNMSLM FIVSKIIKNN KLKLENEFIK DKLEMEYKYY
SNLKDNQEKV KRLYHDIKNH IACIEGNNKE TGIRKKYIDS LNSEIDKLNL GFNTGNEVLD
VILNNKREKC MENNISLKVF IDFSKVNFIE YFDICTIFSN CIDNAIEACK KIKDNNRYIS
LKGNCVNNFY VIKIENSKTN KIKKLNGDFL TDKKDKFLHG IGLKNIRLAL EKYNGEIIIE
PLDDKFILKM LIPINQEKEA
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