Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1679 |
Symbol | |
ID | 4203648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1897013 |
End bp | 1897942 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638082553 |
Product | hypothetical protein |
Protein accession | YP_696117 |
Protein GI | 110799750 |
COG category | [S] Function unknown |
COG ID | [COG3817] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.559939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATGC AAATGATTTC TAATGTATTG CTTGAAATCT TTTATATAAT AGTAGGACTT TTAATGTTAA ATACTGCAAT TGATACATTA AAAGACCAGG AACATAAAAC TAGAATAGGA ACGGCAATCT TTTGGACTAT ATTGTCAATC ATATTTATAG CAGGAGGAGC TATTCCACCT GTAGTAGTAG GGGCATTACT TTTAGTTATA GGAGTATTAA CTGCAAGTAA ACAAGTAAAT ATAGGAAACC TAAAAATGCC TAATGTAGAT TTTGCAGAAA TGCAAGCTAA AAAGTTAAAG AATAAGATTT TTTTACCTTC AATTGTAATA GCAGTTGGAT CTTTAGTTAT TGCACAATTT ACAAGTTTAT CAGGAACTGT TGCCATAGGT ATAGCTTCTG TGGCAGCTGT AATAACAACT TTCTTAGTAT TAAAGGCTAA ACCAAAGCAT TTAGTAGAGG ATAGTAACAG AATGGTTCAA TCAGTTGGAT CTACAAGTAT ATTACCTCAA CTTTTAGCAG CTTTAGGAAC AGTATTTACT GCAGCGGGAG TAGGAGATGT TATATCATCA GGTATATCTA ATTTTATTCC TGAAGGAAAC ATATTAGCAG GTGTAATAGC TTACTGTGTA GGAATGGCAG TATTCACTAT GATAATGGGA AATGCCTTTG CAGCCTTCTC AGTTATAACT GTGGGAATAG GATTGCCATT TGTATTTGCT CAAGGAGCTA ATGTAGCCAT AGCAGGAGCT TTAGCTCTAA CTGCAGGGTA TTGTGGAACA TTATTAACCC CAATGGCAGC AAACTTTAAC GTTATGCCAG CGGCCTTATT AGAGACAAAA GATAAGAATG TGGTTATGAA ATGTCAAAGT TTATTTGCTA TAATTTTATT AGTTATACAT ATAGCTTTAA TGTATTTCTT AGCATTTTAA
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Protein sequence | MNMQMISNVL LEIFYIIVGL LMLNTAIDTL KDQEHKTRIG TAIFWTILSI IFIAGGAIPP VVVGALLLVI GVLTASKQVN IGNLKMPNVD FAEMQAKKLK NKIFLPSIVI AVGSLVIAQF TSLSGTVAIG IASVAAVITT FLVLKAKPKH LVEDSNRMVQ SVGSTSILPQ LLAALGTVFT AAGVGDVISS GISNFIPEGN ILAGVIAYCV GMAVFTMIMG NAFAAFSVIT VGIGLPFVFA QGANVAIAGA LALTAGYCGT LLTPMAANFN VMPAALLETK DKNVVMKCQS LFAIILLVIH IALMYFLAF
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