Gene CPF_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1628 
Symbol 
ID4202731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1845638 
End bp1846543 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content27% 
IMG OID638082506 
Producthypothetical protein 
Protein accessionYP_696071 
Protein GI110798604 
COG category[S] Function unknown 
COG ID[COG2035] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTAACT TTATAAGAGG GTTTTTAATG GCTTTAGCAG ATAGTGTTCC AGGGGTTTCT 
GGTGGTACTA TAGCATTTAT AATGGGATTT TATAATAAGT TTATAAGTTC ATTAAATGCT
TTAACATCTA CAAAAAAAAC TGATGTAAGC AAAAAAGATG CTATAATATT CTTATTAAAA
TTAGGAATAG GTTGGATAAC TGGTATGGTT TTATCAATAT TATTTATAGC ATCAATATTT
GATAAAGAAA TATATAAAAT CAGTTCTTTA TTTACTGGAT TTATAATATT TTCTATACCA
ATAATAATTA GTGAAGACAA AGAATCATTA AAGAAAAACT ATGGATACAT AATATATGCT
ATTTTAGGAA TAGCTATTGT TGCTGCAATA ACATATTTTA ACCCAGCTAC AGGAAGTGCA
AAAGGAACAA GTTTAGTATT AAATGAGTTT TCATTACCAC TTGCACTATA TGTTTTCTTT
GCTGGAATGA TTGCTATATC AGCAATGGTT TTACCAGGGA TATCAGGATC AACATTACTT
TTAATATTTG GTCTTTATGC ACCTGTTGTA AATGGAGTGA AAGAAGTTTT AACATTTAAT
TTTAGTTATT TACCTATGCT TATAGTTTTT GGACTAGGGG TAGTTGTAGG AATAATAACT
ACAATAAGAT TAATAAAATT CTTACTTTCA AATTATAGGT CTCAAATGAT TTATTTTATA
ATAGGATTAA TGATTGGATC TATATATGCA GTTTTTATGG GACCAACTAC ATTAGAGATT
CCAAAGGCTG CTATGAATTT AAGTAGCTTT AATTTCCTAT TCTTTATTAT AGGAGGAGCT
TTAATTTTAG GATTGCAACA GTTAAAAGGA TACCTTGAGA AGAAAGAAAA AGTTTCTAAT
ATATAA
 
Protein sequence
MINFIRGFLM ALADSVPGVS GGTIAFIMGF YNKFISSLNA LTSTKKTDVS KKDAIIFLLK 
LGIGWITGMV LSILFIASIF DKEIYKISSL FTGFIIFSIP IIISEDKESL KKNYGYIIYA
ILGIAIVAAI TYFNPATGSA KGTSLVLNEF SLPLALYVFF AGMIAISAMV LPGISGSTLL
LIFGLYAPVV NGVKEVLTFN FSYLPMLIVF GLGVVVGIIT TIRLIKFLLS NYRSQMIYFI
IGLMIGSIYA VFMGPTTLEI PKAAMNLSSF NFLFFIIGGA LILGLQQLKG YLEKKEKVSN
I