Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1628 |
Symbol | |
ID | 4202731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1845638 |
End bp | 1846543 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 638082506 |
Product | hypothetical protein |
Protein accession | YP_696071 |
Protein GI | 110798604 |
COG category | [S] Function unknown |
COG ID | [COG2035] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTAACT TTATAAGAGG GTTTTTAATG GCTTTAGCAG ATAGTGTTCC AGGGGTTTCT GGTGGTACTA TAGCATTTAT AATGGGATTT TATAATAAGT TTATAAGTTC ATTAAATGCT TTAACATCTA CAAAAAAAAC TGATGTAAGC AAAAAAGATG CTATAATATT CTTATTAAAA TTAGGAATAG GTTGGATAAC TGGTATGGTT TTATCAATAT TATTTATAGC ATCAATATTT GATAAAGAAA TATATAAAAT CAGTTCTTTA TTTACTGGAT TTATAATATT TTCTATACCA ATAATAATTA GTGAAGACAA AGAATCATTA AAGAAAAACT ATGGATACAT AATATATGCT ATTTTAGGAA TAGCTATTGT TGCTGCAATA ACATATTTTA ACCCAGCTAC AGGAAGTGCA AAAGGAACAA GTTTAGTATT AAATGAGTTT TCATTACCAC TTGCACTATA TGTTTTCTTT GCTGGAATGA TTGCTATATC AGCAATGGTT TTACCAGGGA TATCAGGATC AACATTACTT TTAATATTTG GTCTTTATGC ACCTGTTGTA AATGGAGTGA AAGAAGTTTT AACATTTAAT TTTAGTTATT TACCTATGCT TATAGTTTTT GGACTAGGGG TAGTTGTAGG AATAATAACT ACAATAAGAT TAATAAAATT CTTACTTTCA AATTATAGGT CTCAAATGAT TTATTTTATA ATAGGATTAA TGATTGGATC TATATATGCA GTTTTTATGG GACCAACTAC ATTAGAGATT CCAAAGGCTG CTATGAATTT AAGTAGCTTT AATTTCCTAT TCTTTATTAT AGGAGGAGCT TTAATTTTAG GATTGCAACA GTTAAAAGGA TACCTTGAGA AGAAAGAAAA AGTTTCTAAT ATATAA
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Protein sequence | MINFIRGFLM ALADSVPGVS GGTIAFIMGF YNKFISSLNA LTSTKKTDVS KKDAIIFLLK LGIGWITGMV LSILFIASIF DKEIYKISSL FTGFIIFSIP IIISEDKESL KKNYGYIIYA ILGIAIVAAI TYFNPATGSA KGTSLVLNEF SLPLALYVFF AGMIAISAMV LPGISGSTLL LIFGLYAPVV NGVKEVLTFN FSYLPMLIVF GLGVVVGIIT TIRLIKFLLS NYRSQMIYFI IGLMIGSIYA VFMGPTTLEI PKAAMNLSSF NFLFFIIGGA LILGLQQLKG YLEKKEKVSN I
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