Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1613 |
Symbol | rnz |
ID | 4203494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1822317 |
End bp | 1823267 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638082491 |
Product | ribonuclease Z |
Protein accession | YP_696056 |
Protein GI | 110799559 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | [TIGR02651] ribonuclease Z |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAATG TAATCTTGTT AGGAACAGGG GGAGGCATGC CTATGCCAAA TAGATTTTTA TCATCAGTTG TTATGAATTT CAAGGGGAGA AAAATTCTTT TAGACTGTGG AGAGGGAACA CAGGTTACCA TGAGAGTAAA TGGAACTGGA TTTAAAAGTA TAGATATAAT TTGTATAAGT CATCTTCATG GAGATCATAT ATATGGATTG CCAGGATTAC TTTCTACAAT TGGGAATAGT GGAAGAGTAG AGGATATATA TATAATAGGA CCTAAGGGAA TAAAAGAGGT TATAGAGGGA TTTTTAATAA CTCTCCCATA TCTTCCATAT AAACTTAACA TACTAGAAGA TGCAAGCAAT TTAGAATTCA TGGTTAAAAA AGAAAAAATG GAATTAGTTG AAGAGGATGA AAAAATAAGT TCAGATTTAA GTATAAAAAC TCTAGAATTA GACCATTCTT CTCCTTGTTT AGGATACTCT TTTAATATAA GGAGAGGAAG AAAATTTAAT TTAGAAAAAG CATTAATGAA TAAAGTTCCA AAGGAAGTGT GGTCTAAACT TCAAAGAAAT GAGGAAGTTA GTTTAAATGG AGTTAAATAT TATAGTTATA TGGTCTTAGG AGATGAAAGA AAGGGAATAA AACTAAGTTA CACAACAGAT ACAAGACCTA CAGAGGATAT ACCAGGTTTT ATAAAGGAAA GTGATTTATA CATATGTGAA GGGACTTATG GAAGTGAAGA GGATATGCAT AAGGCCATAA AAAATAAACA TATGACTTTT AAGGAGGCAG CTAATTTAGC TAAAAGAGGT CAGGTAAAGG AATTATTATT AACTCATTTT AGTCCAGCTA TTAATGATCC AAAGGAATTT ATAAATAATG CAAGAGAGGC ATTTGAAAAT TCCCATGTTG GAAGTGATGG AGAGGAAAGA GTTTTAAATT TTAAAAAATA A
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Protein sequence | MLNVILLGTG GGMPMPNRFL SSVVMNFKGR KILLDCGEGT QVTMRVNGTG FKSIDIICIS HLHGDHIYGL PGLLSTIGNS GRVEDIYIIG PKGIKEVIEG FLITLPYLPY KLNILEDASN LEFMVKKEKM ELVEEDEKIS SDLSIKTLEL DHSSPCLGYS FNIRRGRKFN LEKALMNKVP KEVWSKLQRN EEVSLNGVKY YSYMVLGDER KGIKLSYTTD TRPTEDIPGF IKESDLYICE GTYGSEEDMH KAIKNKHMTF KEAANLAKRG QVKELLLTHF SPAINDPKEF INNAREAFEN SHVGSDGEER VLNFKK
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