Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1568 |
Symbol | |
ID | 4201671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1785241 |
End bp | 1786269 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638082446 |
Product | glycosy hydrolase family protein |
Protein accession | YP_696011 |
Protein GI | 110800996 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00668816 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAGTA GAAACAATAA TAATTTAAAA GGAATTGATG TATCAAACTG GAAAGGAAAT ATAAATTTTG AGAGTGTAAA AAATGATGGC GTAGAAGTAG TTTATATTAA AGCTACAGAA GGTAATTACT TTAAGGATAA ATACGCTAAA CAAAATTATG AGGGAGCAAA AGAACAAGGA TTAAGTGTAG GGTTTTACCA TTTCTTTAGA GCTAATAAAG GGGCTAAGGA TCAAGCTAAT TTCTTTATAG ATTATTTAAA TGAAATAGGA GCTGTTAATT ATGATTGTAA ATTAGCTTTA GATATAGAAA CTACTGAAGG AGTAGGAGCA AGAGATTTAA CATCTATGTG TATAGAATTT TTAGAAGAGG TAAAAAGACT TACAGGAAAA GAAGTTGTTG TATATACTTA TACAAGTTTT TCAAATAATA ATTTAGATAG TAGATTATCT AATTATCCAG TTTGGATAGC ACATTATGGG GTGAACACTC CTGGAGCTAA TAATATTTGG AGTGAATGGG TTGGATTTCA ATATTCAGAG AATGGAAGTG TAGATGGTGT AAGCGGTGGA TGTGATATGA ATGAGTTTAC AGAAGAAATA TTTATTGATT CAAGTAACTT TAATTTAGAT AATGCTACTA CTAAAAATGT AAGCACTAAA TTAAATATAA GAGCTAAAGG AACTACTAAT TCTAAAGTAA TTGGTTCAAT ACCAGCAAAT GAAACCTTTA AAATAAAATG GGTTGATGAA GATTATCTTG GTTGGTATTA CGTTGAGTAT AATGGAATAG TTGGTTATGT AAATGCAGAT TATGTAGAAA AGCTACAAAT GGCTACTACT CATAATGTAA GTACTTTTTT AAATGTAAGA GAAGAAGGAT CATTAAATTC TAGAATAGTA GATAAGATAA ATGCAGGTGA TATTTTTAGA ATAGATTGGG TGGATTCCGA TTTTATAGGT TGGTATAGAG TAACAACTAA AAATGGAAAA GTTGGATTTG TTAATTCTGA ATTTGTTAAG AAGATCTAA
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Protein sequence | MQSRNNNNLK GIDVSNWKGN INFESVKNDG VEVVYIKATE GNYFKDKYAK QNYEGAKEQG LSVGFYHFFR ANKGAKDQAN FFIDYLNEIG AVNYDCKLAL DIETTEGVGA RDLTSMCIEF LEEVKRLTGK EVVVYTYTSF SNNNLDSRLS NYPVWIAHYG VNTPGANNIW SEWVGFQYSE NGSVDGVSGG CDMNEFTEEI FIDSSNFNLD NATTKNVSTK LNIRAKGTTN SKVIGSIPAN ETFKIKWVDE DYLGWYYVEY NGIVGYVNAD YVEKLQMATT HNVSTFLNVR EEGSLNSRIV DKINAGDIFR IDWVDSDFIG WYRVTTKNGK VGFVNSEFVK KI
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