Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1526 |
Symbol | plsD |
ID | 4202926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1744050 |
End bp | 1744754 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638082404 |
Product | sn-glycerol-3-phosphate acyltransferase |
Protein accession | YP_695969 |
Protein GI | 110799186 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000656832 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTACTC GTATAGGAGC TAATATATTA GTTAGATTAC CGGATAGTAT TTTTAAACCA ATAGCAGGAA AGTTAATCGG TGGATGTTTA AATAAATATG CTGACCTTAA TGTTTATGGA CTTGATAAAA TAAAGAAGGA AGAGGGTCCA TTTATATTTA TAGGAAATCA TTTAAGTAAT GCAGATGGAT TAGTTTTAGA TAAGGTTTTA CAAAAAGAAT ATGATCCATA TTTTATTGCT GGAGTAAAGC TAAATGATGA GGCTTTAACT AATATAGGTA CAAGATTAGT TAAAAATATA AAAATAAAGC CAAATTCAGC AGACAGAGAA TCCCTAAGCA AAATTGTTAA GGCTGTTAAG GGTGGAGAAA ATATAGTTAT TTTCCCAGAA GGAACAAGAA GTAGAAATGC AAAAATGATA GAAGCTAAAA AGGGAATTAT ACTTATAGCA AGATTAACAA AGGCCAAAAT AGTACCTTTT GGAATGACTG GAACTGAAAA GCTTATGCCA ATAAATGATG AAAATATGGG AGCAGAAAAG TTTCATCATT CAAAGGTTAA CATAAAGTTT GGAACTCCTA TTGACCTTCC AAAAAAAGAA AAAGATGAAG GAAAGCATGA GTATGAAGAA AGGGCTTTAA ATTACCTTAT GAAAAATATA GCCAATCTTT TACCAGAAGA TTATAGAGGG GTATATAAGG ATTAG
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Protein sequence | MFTRIGANIL VRLPDSIFKP IAGKLIGGCL NKYADLNVYG LDKIKKEEGP FIFIGNHLSN ADGLVLDKVL QKEYDPYFIA GVKLNDEALT NIGTRLVKNI KIKPNSADRE SLSKIVKAVK GGENIVIFPE GTRSRNAKMI EAKKGIILIA RLTKAKIVPF GMTGTEKLMP INDENMGAEK FHHSKVNIKF GTPIDLPKKE KDEGKHEYEE RALNYLMKNI ANLLPEDYRG VYKD
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