| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1523 |
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| Symbol | |
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| ID | 4202136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1739951 |
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| End bp | 1742314 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 23% |
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| IMG OID | 638082401 |
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| Product | sensory box histidine kinase |
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| Protein accession | YP_695966 |
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| Protein GI | 110798905 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00153524 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAATTG GACTTTTTAA CAATTTAGGT ATTAAAGAGA AAACATTAAA AAGAATAGCA
ATAGTCACAG TAATATTACT TAGTTTATTT TTTATAAAAG GGTTAAATTT AATTTGTGCC
TTAAATAGAG ATTTGTTTAA GGATGTAAGT GTAGTTTATG CTGCTGAAGA AATTATAGTA
ATGACTCAAA TAATTCTTTG TATTATGATA TTATCTATAT GCTTTATATA TTATAGAGGA
CTTAAACGAA AAGAGTTCTT TGGTATATCC CTTGTTTATG TAAGTATTAT TACTGAAATG
ATTTTTATAG TCTTAACAGG AAAAATAGTT GAAAATCAGG TTTATGACTT GAATTTATTT
AGTTTGTTAT TTAGAGGGAT ATTACTACTT TTAGCTGTTT TATGCCTTGA AAATTTTGAT
GCTTTTATAA GGAAATATAA AAAATTAACC TTAGTATTTG TAATATTGGT AACGATTATA
TTACAAATAT TAAATGTTAA TTATAACATA GGAATATATA CATATAATTT TATATATAAT
TTAACTTTAG TTTTAATAGT TTTAACATAT ATATCTTGTA TAATATTTTG TTTAGTTAGA
ATTTTTCAAT TTAGAGAAAT AACTTATTTA GTAATAATGA TAAGTGCTTC ACTTATGTTA
TTAAAATTAG TTTATGGCCT TTCTTTAAGT ATAACTAATA ATAATCTTAT AAAAATAAAC
ATTGTATTTT TTAATTTTAT ATCATTTATG AGCTTTGTAT TTGGTATGTT TTTTGATTTA
CTTCAAGTTA TAAAAAATAA AAATTTTATG CAAGAAGAAC TAAGTGCATT TTTTAACCTA
ATAGAATTTG ATTGTAATAG TGAAGTTGTA GTACTTAGTA ACAATTTAAA AGTTCTTTAT
GCAAATGAAA AATGTAGAAG TAAGAGAATA TCACCTAAAA ATAGAGAAAA TAAAACTTAT
ATTGATTTAG AAAAACAAAT TAAAGGATTT TTATATGATA AAAATATAAT TTGTATAGAA
AGTGTGCTTA GAAATTCTAA GGAATGGAAA GGTATAATAA AGTTAAATGA AGAGGATGAA
GTTGTAAAAG TAAATCTTCA GAGAATAAAA AAAGAAAAAA ATCTTTATTA TGTACTTAGA
ATTAATGATA TAACAGAAGA ATACAAAATG GAGAAAAATT TAAAATTAGA GGAGCAAAGG
CTTAGAGGAG TTACTGAAAA TATAAAAGAT TTAATATTTA CAATTGATGT TGAAGGAAAA
ATAAGCTATG TAAATAAAGC AGTAATAGAT GTTTTAGGAT ATAGTGAAGA AGAATTAATA
GGAAAAAATT ATTATGATTT ATTATTAGTT GAATCTAATT TAAATATAAT AGACAGCAAA
TATTTTAATG AAGATAAGAT TTTAACAATA GATAAGGTAA GATCTAAAAA AGGGTTGGTT
CAATTAGAAT CCATTTCTAG TAGAATTAAG GATAATAAAA ATAATACCTT AGGATGGGTA
AGAGTTGCTA GAAATATAGA GGATGTAAGA GAAATAGAAA TATTAAAGAA TAAATTTGAA
GAAATAAAGC AATATGACAA GGTTAGAAGT GAGTTTTTTG CAAATTTATC TCATGAGCTT
AGAACTCCTA TTAACATAAT ATATTCATGC ATACAGCTTT TAAACACTAG TAAAAAGAAT
AAGGCAAACT TTGCTAATTT ATATGATAAG TATGAAAAAA CTTTAAAACA AAATTGTTTT
AGGATGTTAA GGCTTGTAAA TAATCTTATA GATATAACAA AAATAGACTC TGGTTTTATT
AAGATGGACT TTATTAATTA TGACATAATA AAGCTTACAG AAGATATAAC TATGTCTGTA
ATTCCTTATG TAGAATCTAA GAATATAGAT ATAATCTTTG ATACTAATTG TGAGGAATTA
GAGATAAGAT GTGACCCAGA TAAAATTGAG AGAATAATTT TAAATTTATT ATCTAATGCC
ATAAAATTTA CAGAGCCAGG TGGAAAAATA GAAGTTAGTA TTTTTGCAGA TGAAACTTGG
GTAGATATAA GGGTTAAGGA TACAGGTATA GGAATTCCAT CACACATGAA AGAATTTATT
TTTGAAAGAT TTATACAAAA TGATAAATCC TTAAATAGAA ATAAAGAAGG AAGTGGAATA
GGATTATCCT TGGTTAAATC CTTAGTGGAA TTACATGAAG GAAAAGTTTT CTTAAGAGAA
AGTAATGAAT CAGGTAGTGA ATTTTCAATA TTACTACCTA ATGTGAAATT GGAGAATGAT
GTTTGCGAAA ATGGAAGCTT AGATTATAAA ACAGAGGTTG AAAAAATATC AATAGAGTTT
GCTGATATTT ATGAAATATA TTAG
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| Protein sequence | MLIGLFNNLG IKEKTLKRIA IVTVILLSLF FIKGLNLICA LNRDLFKDVS VVYAAEEIIV
MTQIILCIMI LSICFIYYRG LKRKEFFGIS LVYVSIITEM IFIVLTGKIV ENQVYDLNLF
SLLFRGILLL LAVLCLENFD AFIRKYKKLT LVFVILVTII LQILNVNYNI GIYTYNFIYN
LTLVLIVLTY ISCIIFCLVR IFQFREITYL VIMISASLML LKLVYGLSLS ITNNNLIKIN
IVFFNFISFM SFVFGMFFDL LQVIKNKNFM QEELSAFFNL IEFDCNSEVV VLSNNLKVLY
ANEKCRSKRI SPKNRENKTY IDLEKQIKGF LYDKNIICIE SVLRNSKEWK GIIKLNEEDE
VVKVNLQRIK KEKNLYYVLR INDITEEYKM EKNLKLEEQR LRGVTENIKD LIFTIDVEGK
ISYVNKAVID VLGYSEEELI GKNYYDLLLV ESNLNIIDSK YFNEDKILTI DKVRSKKGLV
QLESISSRIK DNKNNTLGWV RVARNIEDVR EIEILKNKFE EIKQYDKVRS EFFANLSHEL
RTPINIIYSC IQLLNTSKKN KANFANLYDK YEKTLKQNCF RMLRLVNNLI DITKIDSGFI
KMDFINYDII KLTEDITMSV IPYVESKNID IIFDTNCEEL EIRCDPDKIE RIILNLLSNA
IKFTEPGGKI EVSIFADETW VDIRVKDTGI GIPSHMKEFI FERFIQNDKS LNRNKEGSGI
GLSLVKSLVE LHEGKVFLRE SNESGSEFSI LLPNVKLEND VCENGSLDYK TEVEKISIEF
ADIYEIY
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