| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1508 |
|---|
| Symbol | gpmI |
|---|
| ID | 4203015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 1722763 |
|---|
| End bp | 1724301 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638082386 |
|---|
| Product | phosphoglyceromutase |
|---|
| Protein accession | YP_695951 |
|---|
| Protein GI | 110801419 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0696] Phosphoglyceromutase |
|---|
| TIGRFAM ID | [TIGR01307] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAA AACCTGTAAT GTTAATGATA TTAGACGGAT TTGGAATTTC TCCAAACAAA
GAAGGTAATG CAGTAGCTGC TGCTAATAAA CCAAATTATG ATAGATTATT TGCAAAATAT
CCACACACTG AATTACAAGC TTCAGGATTA GAAGTTGGTC TTCCAGAAGG ACAAATGGGT
AACTCAGAGG TTGGTCATTT AAATATAGGT GCTGGTAGAA TAATATACCA AGAGTTAACT
AGAATAACTA AAGAAATAAA AGAAGGAACT TTCTTCACAA ACAAAGCTTT AGTTAAGGCT
ATGGATGAAG CTAAAGAAAA TAATACTTCA TTACACTTAA TGGGATTATT ATCAAACGGA
GGGGTTCACT CTCACATAGA TCACTTAAAA GGTCTTTTAG AGTTAGCTAA GAAAAAAGGA
CTTCAAAAAG TTTACGTTCA TGCTTTCATG GATGGTAGAG ACGTTGCTCC ATCATCAGGT
AAAGAATTCA TAGTTGAATT AGAAAATGCT ATGAAGGAAA TTGGTGTTGG TGAAATAGCT
ACTATAAGTG GTAGATATTA CGCAATGGAT AGAGATAACA GATGGGAAAG AGTAGAATTA
GCTTATAACG CTATGGTTTT AGGAGAAGGT GAAAAAGCTT CTTCAGCTGT TGAAGCTATA
GAAAAATCTT ACCATGATAA CAAAACTGAC GAGTTCGTTT TACCTACAGT AATTGAAGAA
GATGGACACC CAGTTGCTAG AATTAAAGAT GGAGACTCAG TAATATTCTT TAACTTTAGA
CCAGATAGAG CTAGAGAAAT AACTAGAGCT ATAGTTGATC CAGAATTCAA AGGATTTGAA
AGAAAGCAAT TACACGTAAA CTTTGTTTGT ATGACTCAAT ATGACAAAAC TTTAGAGTGT
GTAGATGTTG CTTATAGACC AGAAAGTTAC ACAAATACTT TAGGAGAATA TGTTGCATCT
AAAGGATTAA ACCAATTAAG AATTGCTGAA ACTGAAAAAT ATGCTCACGT AACATTCTTC
TTTAACGGTG GAGTAGAACA ACCAAACACT AATGAAGATA GAGCATTAAT AGCTTCACCA
AAGGTTGCTA CATACGATCT TAAACCAGAA ATGAGTGCTT ATGAAGTAAC TGATGAATTA
ATAAATAGAT TAGATCAAGA CAAATATGAC ATGATAATAT TAAACTTCGC TAACCCAGAT
ATGGTTGGAC ACACTGGAGT ACAAGAAGCA GCTGTTAAAG CTATAGAAGC AGTTGATGAG
TGCTTAGGAA AAGTAGCTGA TAAGGTATTA GAAAAAGAAG GTACTTTATT CATAACTGCT
GACCATGGTA ATGCAGAAGT AATGATAGAT TACTCAACTG GTAAACCAAT GACTGCTCAT
ACTTCAGATC CAGTTCCATT CTTATGGGTA TCAAAAGATG CTGAAGGAAA ATCATTAAAA
GATGGTGGAA AATTAGCTGA TATAGCTCCA ACTATGTTAA CTGTTATGGG ATTAGAAGTT
CCATCAGAAA TGACTGGAAC ATGTCTTTTA AACAAATAA
|
|---|
| Protein sequence | MSKKPVMLMI LDGFGISPNK EGNAVAAANK PNYDRLFAKY PHTELQASGL EVGLPEGQMG
NSEVGHLNIG AGRIIYQELT RITKEIKEGT FFTNKALVKA MDEAKENNTS LHLMGLLSNG
GVHSHIDHLK GLLELAKKKG LQKVYVHAFM DGRDVAPSSG KEFIVELENA MKEIGVGEIA
TISGRYYAMD RDNRWERVEL AYNAMVLGEG EKASSAVEAI EKSYHDNKTD EFVLPTVIEE
DGHPVARIKD GDSVIFFNFR PDRAREITRA IVDPEFKGFE RKQLHVNFVC MTQYDKTLEC
VDVAYRPESY TNTLGEYVAS KGLNQLRIAE TEKYAHVTFF FNGGVEQPNT NEDRALIASP
KVATYDLKPE MSAYEVTDEL INRLDQDKYD MIILNFANPD MVGHTGVQEA AVKAIEAVDE
CLGKVADKVL EKEGTLFITA DHGNAEVMID YSTGKPMTAH TSDPVPFLWV SKDAEGKSLK
DGGKLADIAP TMLTVMGLEV PSEMTGTCLL NK
|
|---|
| |