Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1500 |
Symbol | |
ID | 4200989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1711478 |
End bp | 1712086 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638082378 |
Product | putative lipoprotein |
Protein accession | YP_695943 |
Protein GI | 110798925 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000964611 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGTTT TAAAAGGGGT AATTTTAGCT ATAATTCCAG CATTCTTATT TATGGGATGT GGAGAATTTT CTAAAAATGA TGTTGCAAAG GTAAGTTTTG AGAAGCTTTC AGAAAAAGAG GAGCAGATTT TAAATTTGAC TGACAATAGA GTTTTTTTCT ATAAGGTGAA AAACATTTCT AAAAATAAGG GTTATAGGAT TGATTTAAAT TATGAGGTTT ATAAAGAGGG AAAAGAAGTG AAAAATGAAC CGATTTTGAC AAGTGTAAGT GAAACATATG AAAAGGGGAA AGAGAATATA ACCTTAGGAA TAAACTTTAA AGATGATAAT AGGATAAATT GTCTTTTAGG TGGAGATGGA GCTTATAGTC GTCATAATTA CAAGGCTGAG GAAAATATAA AGGACTATTT TAGTGCTAAT TTTGCTGGTG ATTATGATTT AGAGCTTGAA AAAGGAAAGA GAGTTTGTCT TTATTATGCA ACTTTAGGAA ATGGAATTAG TAGTAATGTT ATAGGAATGA ACATGGATTC AGAGGAAATA AAAGAAACTA TTAATAGAAA TAATGACTGT ATTTTCTTAA GTATAAGTGT AGATGATTTT AGTGAGTAG
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Protein sequence | MRVLKGVILA IIPAFLFMGC GEFSKNDVAK VSFEKLSEKE EQILNLTDNR VFFYKVKNIS KNKGYRIDLN YEVYKEGKEV KNEPILTSVS ETYEKGKENI TLGINFKDDN RINCLLGGDG AYSRHNYKAE ENIKDYFSAN FAGDYDLELE KGKRVCLYYA TLGNGISSNV IGMNMDSEEI KETINRNNDC IFLSISVDDF SE
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