Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1468 |
Symbol | |
ID | 4203514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1656030 |
End bp | 1656944 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638082346 |
Product | hypothetical protein |
Protein accession | YP_695911 |
Protein GI | 110799771 |
COG category | [V] Defense mechanisms |
COG ID | [COG3440] Predicted restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.978213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGATAGAA TTAAATCATG GGAATATGAT GATGTTTATA ATAAATTTGC CATAAAGGAT TTAGATAAAT CCTCATTTAA GAGGGGAAGC CATATACCAA TAAAGGTTAG AAAGGTCTTT GAATGTGAAG ATATTAAATA TGGAGATAAG AAGAAAATAA CTCTTATATA TAAAGGGGAA GCCTTTGAAG CTGAAATAGA AGGCGGAATC AAAGGTAGAA TACGAATGAA TTGGCCAAAG TTAATACCTA AAATGAAGGA AGTTTTTAAA AATGAAATAA ATGACTTTGA AGATTCTAAA GAGCTTAGTG TAAGAGTGCC TAGATTGAAA TTTACAAAGG AAACAGCCAT AAAATATGAT GTGGAAATGA AAACTAAATA TAGTCATGAT GTTCTTTTTG AGTTAGAAAG GCTAGATATA GATGTTGAAA ATAAAACCAT AGAAGAAATA AATGAAGTGG GAGAAGTTAT AGAGAGGATT GTTAAGGCTA GAAAAAATCA AAACAAATTT AGAGAAGCAC TATTTAAAAG AGAGAGTAAG TGTAAAATTT GTGGACTAGC TCATAAGGAG CTTTTAATAG CAAGCCATAT AAAACCTTGG AGTAAAAGTA CACCAGAGGA AAAGCTAAAT CCCTTTAATG GATTCTTACT ATGCCCAAAT CATGATTCCT TATTTGATAA GCATTTAATA AGCTTTCAGG ATAATGGAGA AATCATAATA TCTAAAAGGC TCTCAGAAAA GGAGCAGGAG CTACTAAACA TAAATAAGGA TATCGTGGTT AATATTGAAG ATGGAAACAA GAAGTTTTTA AAGGAGCATA GAAAGGTTTT TTATGATATA GAGGAGGCCT ATACTGTAGA GAAAGAATTA GCAATAAGCA ATAAGGAAAT ATATAAGGTT GAATTAGAAG TTTAA
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Protein sequence | MDRIKSWEYD DVYNKFAIKD LDKSSFKRGS HIPIKVRKVF ECEDIKYGDK KKITLIYKGE AFEAEIEGGI KGRIRMNWPK LIPKMKEVFK NEINDFEDSK ELSVRVPRLK FTKETAIKYD VEMKTKYSHD VLFELERLDI DVENKTIEEI NEVGEVIERI VKARKNQNKF REALFKRESK CKICGLAHKE LLIASHIKPW SKSTPEEKLN PFNGFLLCPN HDSLFDKHLI SFQDNGEIII SKRLSEKEQE LLNINKDIVV NIEDGNKKFL KEHRKVFYDI EEAYTVEKEL AISNKEIYKV ELEV
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