| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1455 |
|---|
| Symbol | |
|---|
| ID | 4203411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 1637336 |
|---|
| End bp | 1638307 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 638082333 |
|---|
| Product | oxidoreductase family protein |
|---|
| Protein accession | YP_695898 |
|---|
| Protein GI | 110798876 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00550696 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TTAAATGGGG AATATTAGGA CCAGGAAATA TAGCTAGAGA CTTTGCACAG
GCTTTAAATA GGGTTAATGG AGAGGTTTAT GCAGTAGCTT CTAGAAATAA GGAAAGAGCA
GAGAAATTTG CAAGAGAAAA CAATGTTAAA AAAGCTTATG GAAGCTATGA TGAGATTATA
AAAGACAAGG ATATAGATGT AGTGTATATA GCAACACCAC ACAGTAATCA TTATGAGTAC
ATTATAAAAA GTTTAAATAA TAATAAACAT GTTCTATGTG AAAAGGCTAT AACTGTAAAT
GAAAGAGAGT TAGAAGAAGC CTTAAAAATA GCAAGAGAGA AAAATTTAGT TTTAGAAGAA
GCAATGACCT TATTTCATAT GCCCTTATAT GAAAAGGTTA TAAAGAAGAT AAATAATGAA
GACTTAGGAA AAGTGAATAT GGTTCAAGTT TCCTTTGGAA GCTTCAAGGA ATATGATGAA
AATAACAGAT TCTTTAATCT TGATTTAGCT GGAGGAGCAC TTTTAGATAT TGGAACTTAT
GCCTTATCCT TTGCAAGATA TTTCTTATCT AGTATGCCAG AGGAAATCTT AAGTACAGTT
AAGAAGGCTA AAACTGGTGT AGATGAAGAG TCTGGAATAA TATTAAAGAC AAAGGAAGAT
GAAATTGCAA CTATATCCCT AGCCTTTAGA TCTAAAATGC CTAAGAGAGG AATTGTTTCC
TGTGACAATG GATTTATAAC AATTGATAAT TTCCCAAGAG CTAATAAGGC AACCATAAAC
TACTTAGATG GTGCAGTAGA AGTTATAGAG TGTGGAGAAG AGGAAAAGGC CTTAGATTAT
GAAGTTATCT TTATGGAAGA GAGAATAAAG GAAAATAAAG AATCTAATAG TATAGAACTA
ACTTATGATG TTACAAAGAT TATGAATAAG GTTAGAAAAG ACTGGGGAAT TGTTTATCCC
TTTGAAAAAT AA
|
|---|
| Protein sequence | MKKLKWGILG PGNIARDFAQ ALNRVNGEVY AVASRNKERA EKFARENNVK KAYGSYDEII
KDKDIDVVYI ATPHSNHYEY IIKSLNNNKH VLCEKAITVN ERELEEALKI AREKNLVLEE
AMTLFHMPLY EKVIKKINNE DLGKVNMVQV SFGSFKEYDE NNRFFNLDLA GGALLDIGTY
ALSFARYFLS SMPEEILSTV KKAKTGVDEE SGIILKTKED EIATISLAFR SKMPKRGIVS
CDNGFITIDN FPRANKATIN YLDGAVEVIE CGEEEKALDY EVIFMEERIK ENKESNSIEL
TYDVTKIMNK VRKDWGIVYP FEK
|
|---|
| |