Gene CPF_1426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1426 
Symbol 
ID4201247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp1608068 
End bp1609066 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content29% 
IMG OID638082306 
Productiron(III) ABC transporter, iron(III)-binding protein 
Protein accessionYP_695871 
Protein GI110798602 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0283487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAGAA AAAGAATTTT AGGTTTAGCT ACTATAGGGT TAGTATTTTC CTTAGCTTTA 
GCAGGATGTA CTGGAAGTTC AAAGGAAAGT ACAGCTTCAA AAAACACTGA GGAAGGTTAC 
CCAGTAACAA TAAGTACATA TGATCAAAGT GGAAAGGAAT TTCAGGAAAC TTTTGAAAGT 
AAACCTAAGA GGGTTATTAG TACAAATCAA ACTACTACAG AAATAATGCT TGATTTAGAT 
TTACAGGATT CCTTAGTTGG AACATCATTT ATGGATAGTC CTATACTTCC AAGATTAGAA 
GATAAGTATA AAAATATAAA TGTTCTATCA GAAACATATC CAAGTAAGGA AGCTGTTTTA 
GCTTTAAATC CAGATTTAAT AATGGGATGG AAAAGTGTAT TTTCAGATAA AAATCTAGGT 
TCTGTAGAAT CATGGAATGA AAAAGGGGTT AAAACTTTTA TTCAAAGAAA CTCTGGTATT 
TCAAAAGAGC AGACTTTAGA TGATGTTTAT TATGATATAA ATGATATAGG TAAGATATTT 
AATATAGAAG AAAAATCAAC TAAATATGTT GATGATATGA AAGAAAGAAT AAATAATATT 
TCTGAAAAGA TAAAATCAGT TAAAGAACCT ATGAAAGTTT TAGTAATAGA AGGTGAAGGA 
GAAAATAAAT ATAGAGTTTA TGGACCTAAA ACCTTAGTTT CAGATATGGT TTCAAAAGCT 
GGTGGTACTA ATGTGGCAAA GGAATCAGGT AGTGTTGGAG TTGAGAATAT AATAGAAATG 
AACCCAGATG CTATAGTTCT TATACATTAC TTAAATCAAA ATAAAGATAA CAAAGAAGAA 
AAAGCATTAT TAGAAAATCC AGCTTTAAAA AATGTAACTG CAATAAAAGA AAATAAAATA 
ATATATACTC CTCTTTCAGA AACATATGCA GGTGGTGCAA GAACTGTAGA GGGAATAGAA 
AGAATAGCAA AGGGATTATA CCCAGACTTA TTAAAATAA
 
Protein sequence
MRRKRILGLA TIGLVFSLAL AGCTGSSKES TASKNTEEGY PVTISTYDQS GKEFQETFES 
KPKRVISTNQ TTTEIMLDLD LQDSLVGTSF MDSPILPRLE DKYKNINVLS ETYPSKEAVL 
ALNPDLIMGW KSVFSDKNLG SVESWNEKGV KTFIQRNSGI SKEQTLDDVY YDINDIGKIF 
NIEEKSTKYV DDMKERINNI SEKIKSVKEP MKVLVIEGEG ENKYRVYGPK TLVSDMVSKA 
GGTNVAKESG SVGVENIIEM NPDAIVLIHY LNQNKDNKEE KALLENPALK NVTAIKENKI 
IYTPLSETYA GGARTVEGIE RIAKGLYPDL LK