Gene CPF_1424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1424 
Symbol 
ID4202755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1606212 
End bp1606967 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content27% 
IMG OID638082304 
Productiron(III) ABC transporter, ATP-binding protein 
Protein accessionYP_695869 
Protein GI110800231 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000297439 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGAT TAGAAGAGTT AGAAGTTTCT ATAAACAAGA GTGAAATTAT AAAGGGAGTT 
TCATTTCATG TTAATAAGGG TGATTTTGTT GGGCTTATAG GGCCAAATGG AAGCGGAAAA
TCAACCATAT TAAAAACTAT ATATAAGTTA ATTGATAAAA AATGTGGGGC AATATACATA
AATGGTAAAG AAATAGACAG TATTAGCATA AAGTCAATGG CAAGAGAATT AGCAGTAGTA
AGCCAATTTA ATCAATATAA TTTTAGCTTT AAGGTTAAAG ATATTGTTCT TATGGGAAGA
AATCCATATA AAAGAACTTT TCAATTAGAC AATAAAGAAG ATTATGACAT AGTAAGAGAG
GCTTTAGAAA AGGTTAATAT GCTTGAATAT AAGGATAGAG ATTTTCTGAA TCTTTCAGGA
GGAGAAAAAC AAAGGGTATT ATTAGCAAGA GCCTTAGCAC AAAAAACAGA AATTCTTTTA
TTAGATGAAC CTACAAATCA TTTAGATATT AAGTATCAAA TAGAAATAAT GAATATAGTT
AAAGAGTTAA ATATAACGGT ATTAGCTGCA CTTCATGATA TGAATTTAGT TTCAGCTTAC
TGTAATAAAG TATATATGAT TGATAAAGGA AAAGTAGTTT ATGGAGGAGA AACAAAAGAA
GTTTTAACTC CTAAAAATAT AAAAGATGTT TTTGGTGTTG AATGTGAAAT AGGAGAAAAT
TCAAAAGGAC ATATAACAAT AAACTTTTTA TTTTAG
 
Protein sequence
MIRLEELEVS INKSEIIKGV SFHVNKGDFV GLIGPNGSGK STILKTIYKL IDKKCGAIYI 
NGKEIDSISI KSMARELAVV SQFNQYNFSF KVKDIVLMGR NPYKRTFQLD NKEDYDIVRE
ALEKVNMLEY KDRDFLNLSG GEKQRVLLAR ALAQKTEILL LDEPTNHLDI KYQIEIMNIV
KELNITVLAA LHDMNLVSAY CNKVYMIDKG KVVYGGETKE VLTPKNIKDV FGVECEIGEN
SKGHITINFL F