Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1424 |
Symbol | |
ID | 4202755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1606212 |
End bp | 1606967 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 638082304 |
Product | iron(III) ABC transporter, ATP-binding protein |
Protein accession | YP_695869 |
Protein GI | 110800231 |
COG category | [H] Coenzyme transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000297439 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAGAT TAGAAGAGTT AGAAGTTTCT ATAAACAAGA GTGAAATTAT AAAGGGAGTT TCATTTCATG TTAATAAGGG TGATTTTGTT GGGCTTATAG GGCCAAATGG AAGCGGAAAA TCAACCATAT TAAAAACTAT ATATAAGTTA ATTGATAAAA AATGTGGGGC AATATACATA AATGGTAAAG AAATAGACAG TATTAGCATA AAGTCAATGG CAAGAGAATT AGCAGTAGTA AGCCAATTTA ATCAATATAA TTTTAGCTTT AAGGTTAAAG ATATTGTTCT TATGGGAAGA AATCCATATA AAAGAACTTT TCAATTAGAC AATAAAGAAG ATTATGACAT AGTAAGAGAG GCTTTAGAAA AGGTTAATAT GCTTGAATAT AAGGATAGAG ATTTTCTGAA TCTTTCAGGA GGAGAAAAAC AAAGGGTATT ATTAGCAAGA GCCTTAGCAC AAAAAACAGA AATTCTTTTA TTAGATGAAC CTACAAATCA TTTAGATATT AAGTATCAAA TAGAAATAAT GAATATAGTT AAAGAGTTAA ATATAACGGT ATTAGCTGCA CTTCATGATA TGAATTTAGT TTCAGCTTAC TGTAATAAAG TATATATGAT TGATAAAGGA AAAGTAGTTT ATGGAGGAGA AACAAAAGAA GTTTTAACTC CTAAAAATAT AAAAGATGTT TTTGGTGTTG AATGTGAAAT AGGAGAAAAT TCAAAAGGAC ATATAACAAT AAACTTTTTA TTTTAG
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Protein sequence | MIRLEELEVS INKSEIIKGV SFHVNKGDFV GLIGPNGSGK STILKTIYKL IDKKCGAIYI NGKEIDSISI KSMARELAVV SQFNQYNFSF KVKDIVLMGR NPYKRTFQLD NKEDYDIVRE ALEKVNMLEY KDRDFLNLSG GEKQRVLLAR ALAQKTEILL LDEPTNHLDI KYQIEIMNIV KELNITVLAA LHDMNLVSAY CNKVYMIDKG KVVYGGETKE VLTPKNIKDV FGVECEIGEN SKGHITINFL F
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