| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1403 |
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| Symbol | |
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| ID | 4201978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1576487 |
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| End bp | 1577164 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 638082283 |
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| Product | DNA-binding response regulator |
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| Protein accession | YP_695848 |
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| Protein GI | 110800369 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000398651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATTT TAATAGCTGA GGATGAACAA GATATAAGAA ATCTTTTAGA ATTGCATTTA
TTAAAGGAAG GATACACTGT ATTTAAGGCT GTAAATGGAT TAGAAGCCTT AGATATCTTA
AAAAAAGAAC ATATACATTT AGCCTTATTA GATGTTATGA TGGATGGAAT AGATGGCTTT
AATCTATTAA AGATGTTAAG GGAATGGAGT CAGATTCCAG TTATATTTTT AACTGCTAAA
ATTGAGGATG ATGATAAAAT ATTAGGTTTA GGCTTAGGGG CTGATGATTA TGTTATAAAA
CCTTTTAAAC CTGTAGAACT TATGGCTAGG ATTAAATCAA ATTTAAGAAG GTGTTATAAA
TATTCTGGAG AAAATGAACT TATAAAAATA GGAAATTTAG AACTTAGTAA AGAAGGATGT
ACAGTTAAAA AAGATGGAGA AATAGTAACT TTAAACGCAA AGGAATTTAA AATTTTAGAA
ATGCTTATGA GCAACATTGG AAGAGTGTTT ACTAAAAAAC AAATATATGA AAATGTATGG
CAAGAGGAAT ATTTAGGTGA TGACAATACT ATAATGGTTC ATATAAGCCA CTTAAGAGAT
AAGATAGAGG AAGATCCTAA AAATCCTTGC AAGATAAAAA CTATAAGAGG GATAGGATAT
AGGTTTGAAA AAATTTAA
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| Protein sequence | MNILIAEDEQ DIRNLLELHL LKEGYTVFKA VNGLEALDIL KKEHIHLALL DVMMDGIDGF
NLLKMLREWS QIPVIFLTAK IEDDDKILGL GLGADDYVIK PFKPVELMAR IKSNLRRCYK
YSGENELIKI GNLELSKEGC TVKKDGEIVT LNAKEFKILE MLMSNIGRVF TKKQIYENVW
QEEYLGDDNT IMVHISHLRD KIEEDPKNPC KIKTIRGIGY RFEKI
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