Gene CPF_1376 details

Gene Information

• Locus tag: CPF_1376
• ID: 4201359
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 1552668
• End bp: 1553204
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 638082257
• Product: hypothetical protein
• Protein accession: YP_695822
• Protein GI: 110801014
• COG category: [S] Function unknown
• COG ID: [COG4720] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00410827
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGTTA ACACTAACAG TAAATTTCAT AAGACAGTTT TTACAGCACT AATGATTGCA 
ATAATATTTA TATCAGCAAA TTTAATAAGA ATTCCTACTG TAGGAGGCTT TGTTCATCTT 
GGAGATTGTA TGGTTCTTTT AGCAGCAGCC TTACTAGGGA AAAAGCGTGG AGCTTTAGCT 
AGTGGTATAG GAATGGCTCT TGTGGATTTA TATAGTGGAT ATATAATTTG GGCACCTTTT 
ACATTTATAA TAAAAGCTTT AATGGCATAT ATAGCTGGAG CTATTTTAGA GTATAATCAT 
AGAAAAAGTT ATTTAGTACC ATTTTTAATC TCTGGTATAT TTATGGTTGT AGCTTATTTC 
TTCTCTGGTG CAATAATAGC ATTTTTATTT ACAGGAAGTT CTAATACCAT AATAGGAGCT 
TTAGCATATT CAGCAAAGGA TATAATAGGT AATATACTTC AAGTTGGGGT TGGTATAGTT 
ATAGCCTTAC CTCTTTCAAA AGTATTATAT AAGCAAGAAA AGAAAGCCTT TAATTAA 

 

Protein sequence

MNVNTNSKFH KTVFTALMIA IIFISANLIR IPTVGGFVHL GDCMVLLAAA LLGKKRGALA 
SGIGMALVDL YSGYIIWAPF TFIIKALMAY IAGAILEYNH RKSYLVPFLI SGIFMVVAYF 
FSGAIIAFLF TGSSNTIIGA LAYSAKDIIG NILQVGVGIV IALPLSKVLY KQEKKAFN