Gene CPF_1364 details

Gene Information

• Locus tag: CPF_1364
• Symbol: lexA
• ID: 4203478
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 1541479
• End bp: 1542090
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 638082245
• Product: LexA repressor
• Protein accession: YP_695810
• Protein GI: 110801397
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases)
• TIGRFAM ID: [TIGR00498] SOS regulatory protein LexA

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000105475
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTATTA AGGAAAATTC AGATAAACAA ACTCAAATAT ATAACTTTTT AATTGAATTT 
ACAAAATCAA AGGGGTATCC ACCTTCAGTT AGAGAGATAT GTCAAGCAGT TAGCTTGAAA 
TCAACTTCAA CTGTTCATGG ACATTTAAAG AGATTAGAGA AAAAAGGATT AATATATAGA 
GATCCAACTA AGCCAAGAGC TTTAGAAATA GTAGAATTAT CTAACGAAGA AAAGGAATTA 
ATAGATATTC CTATAGTAGG TAAAGTTACT GCTGGTATGC CTATTTTAGC TACAGAGAAC 
ATAGAAGATA TGTTTCAAAT ACCGATAAAC TACGTTAAGC ACAATAATGA TTTATTTATT 
TTAAAAGTTA CTGGAGACAG TATGATAGAA GCCGGAATCT TAGATGGAGA TTTAGCAATA 
ATAGAACAGA AAAACGTAGC AACAAATGGT GATATTGTAG TAGCTCTAAT AGAAAATGAA 
GCTACCATAA AAAGATTTTT TAAGGAAAAT GGATTTATAA GACTACAACC AGAAAACAAA 
AACTATGAAC CTATAATAGT TGAAGATTGC TCTATTTTAG GTAAATTAGT AGGAATTTAT 
AGAGCTTATT AA 

 

Protein sequence

MIIKENSDKQ TQIYNFLIEF TKSKGYPPSV REICQAVSLK STSTVHGHLK RLEKKGLIYR 
DPTKPRALEI VELSNEEKEL IDIPIVGKVT AGMPILATEN IEDMFQIPIN YVKHNNDLFI 
LKVTGDSMIE AGILDGDLAI IEQKNVATNG DIVVALIENE ATIKRFFKEN GFIRLQPENK 
NYEPIIVEDC SILGKLVGIY RAY