| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1349 |
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| Symbol | miaB |
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| ID | 4202345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1521576 |
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| End bp | 1522919 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638082230 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_695795 |
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| Protein GI | 110800579 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTAG AAAATAACAT GGATAAAAAA CTCTTCTGTA TTTCTACATA CGGATGCCAA
ATGAATGAAG AAGATTCAGA AAAATTATCA GGGATGTTAA AATCTCAAGG ATATGAAAGA
ACTGAAAATA AAGAAGAGGC TTCTATTATA ATCTTTAATA CATGTTGTGT AAGAGAAAAT
GCTGAAAATA AGGTTTTTGG TAATCTTGGA CAACTTAAGC AATTAAAAAA GAAAAATCCT
AACTTAGTAA TAGCGATTTG TGGATGTATG ATGCAACAAG TAGGTATGGC AGACAAAGTC
TTAAAAACTT TCCCTTATGT TGACATAATA TTTGGAACAC ATAATGCCCA TAAATTCCCT
GAATACCTAC ATAGAGTACT TCAAGAAGGT GTTCAAGTTA AGGAAATATT AAACAAAGAA
GAAGGAATCG TTGAAGGATT ACCTATAGAT AGAAAGAGTG ATGTTAAAGC ATTCGTTACT
ATCATGTATG GATGTAACAA CTTCTGTACA TACTGTATAG TTCCTTACGT TAGAGGAAGA
GAAAGAAGTA GAAAATCTGA GGATATCATA AAAGAAATAG AAGAATTAGT ATCTCAAGGA
TATAAAGAAA TAACTTTATT AGGACAAAAC GTAAACTCAT ATGGAAAAGG ATTAGAAGAA
GATATAGATT TTGCTGGTCT TTTAAGAAAA GTTAATGAAG TTAAGGGTTT AGAGAGAGTT
AGATTTATGA CTTCTCATCC TAAGGATTTA AGTGATGATG TTATCATGGC TATAAAAGAA
TGTGATAAGC TTTGTGAACA AGTTCACTTA CCAGTTCAAA GTGGATCATC AAGAATATTA
AAAGAGATGA ATAGACACTA TGACAGAGAG TACTACTTAG ATTTAGTTAA GAAAATAAAA
TCAGAAATAC CAGATGTTAC TTTAACAACT GATATAATCA TTGGATTCCC AGGAGAAACT
GAAGAGGACT TCTTAGATAC ATTAAGTCTT TGTGAAGAAG TTGGATATGA TTCAGCATTT
ACATTTATCT ATTCAAGAAG AAATCATACT CCTGCTGACA AAATGGAAAA TCAAATTCCA
GATGATATAA AGCATGATAG ATTTAATAGA TTAGTTGAAG CTATAAACAA AAAGGTTGTA
ATAAAAAATA AAGAATATGA AGGTAAGGTA GTTGAAGTTC TTGTTGAAGG ACCAAGTAAG
AATGATGAAA CTAAATTAAC TGGAAGAACT AGAAATGGTA AATTAGTTAA CTTTGCTGGT
GATGAAAAAC TAGTAGGTGA ATTAGTTAAC TTAAAAATAG TTAGAGCACA ACCATTCTCA
TTAATTGGTG AAATAGTAGA ATAA
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| Protein sequence | MTLENNMDKK LFCISTYGCQ MNEEDSEKLS GMLKSQGYER TENKEEASII IFNTCCVREN
AENKVFGNLG QLKQLKKKNP NLVIAICGCM MQQVGMADKV LKTFPYVDII FGTHNAHKFP
EYLHRVLQEG VQVKEILNKE EGIVEGLPID RKSDVKAFVT IMYGCNNFCT YCIVPYVRGR
ERSRKSEDII KEIEELVSQG YKEITLLGQN VNSYGKGLEE DIDFAGLLRK VNEVKGLERV
RFMTSHPKDL SDDVIMAIKE CDKLCEQVHL PVQSGSSRIL KEMNRHYDRE YYLDLVKKIK
SEIPDVTLTT DIIIGFPGET EEDFLDTLSL CEEVGYDSAF TFIYSRRNHT PADKMENQIP
DDIKHDRFNR LVEAINKKVV IKNKEYEGKV VEVLVEGPSK NDETKLTGRT RNGKLVNFAG
DEKLVGELVN LKIVRAQPFS LIGEIVE
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