Gene CPF_1340 details

Gene Information

• Locus tag: CPF_1340
• Symbol: cmk
• ID: 4203941
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 1514990
• End bp: 1515643
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 638082221
• Product: cytidylate kinase
• Protein accession: YP_695786
• Protein GI: 110800020
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0283] Cytidylate kinase
• TIGRFAM ID: [TIGR00017] cytidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0841827
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAC TAATTACAGT TGCTATTGAT GGACCAGCAG GAGCTGGAAA AAGTACTATT 
GCTAAAATAA TAGGAGAAAA ATTTAATTTA ATGTATATAA ACACAGGATC TATGTATAGA 
GCTGTTACTT TAAAAGCCTT AGAAAATAAT ATTTCAGCTG AAGAAGTTGA TAAATTATTA 
GTTATGATAG ATGGAATGGA TATGCATTTT GAAAATGATG AGCTTATATT AAATGGAGAA 
AATATAAACT CATTAATAAC TATGCCTAAC ATAAGTAAAA ATGTTTCAGC TTATGCTTCA 
ATAAGAGAAG TAAGGGAAAG ATTAGTTAAT CTTATGAGAA AAATGGCCTT AAAATATAGC 
GTAATAATGG ATGGTAGAGA CATTGGAACA GTTGTATTAA AAGATGCTAA TTTCAAATTT 
TTCTTAACTG CTAGCCCAGA AGAAAGAGCT GATAGAAGAT ATAAAGAGCT TATGGGAAAA 
GGTGTAGAAG TTAATTATGA TGAAATATTA CAAGATATAA TAAAAAGAGA TTACCTAGAT 
TCTAATAGAG AAGTAGATCC TCTAAGAAAA GCTGAGGATG CTATTGAAAT TGATACTACT 
GGCATAGGTA TAATGGGAGT AGTTGAAAAA ATATCTAGCT ACATGGAGAA ATAA 

 

Protein sequence

MNKLITVAID GPAGAGKSTI AKIIGEKFNL MYINTGSMYR AVTLKALENN ISAEEVDKLL 
VMIDGMDMHF ENDELILNGE NINSLITMPN ISKNVSAYAS IREVRERLVN LMRKMALKYS 
VIMDGRDIGT VVLKDANFKF FLTASPEERA DRRYKELMGK GVEVNYDEIL QDIIKRDYLD 
SNREVDPLRK AEDAIEIDTT GIGIMGVVEK ISSYMEK