Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1295 |
Symbol | |
ID | 4203832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1467500 |
End bp | 1468564 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 638082176 |
Product | threonine-phosphate decarboxylase |
Protein accession | YP_695741 |
Protein GI | 110800703 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
TIGRFAM ID | [TIGR01140] L-threonine-O-3-phosphate decarboxylase [TIGR01141] histidinol-phosphate aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.806359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAG GACATGGTGG TAATGTAGAA GAAATTAAGA GGATTTATGG CTTAAAAGAA AATAAAATTA TTGATTTTTC AGCTAATATA AACCCCCTAG GAATCTCTGA AAGAGTAAAA GAGGCTATGG TAAGAGGAAT AAATTCTATA GAGAGATATC CAGATATAAC TTATTATGAG CTTAAAAAAG AAATTTCAAA CTTTGAAAAG GTAGCTTTAG AAAATATAGT TCTAGGAAAT GGTGCAGCAG AGGTTATTTT TAATATAGTA AGAGGAATAA AACCTAAAAA GGCCCTTATA GTAGCACCAA CCTTTTCAGA GTATGAGGAT GCTTTAAATT CTGTTGAGTG TGAAGTTAAC CATTATATAT TAAAAGATAA TTATTCAGTA GATAATGGAT TTTTAGAAGA AATCAAGGAA GAATTAGATA TTATATTTTT ATGCAATCCC AATAATCCTA CAGGTGCTTT AATAGAAAAA GATTTTTCAT TAAAAGTATT GGAAAAAGCA AAAAAAATGA ATATTACAGT TGTTTTTGAT GAATCTTTCT TAGACTTTGT TGAAGATAAT TATAGATACT CTCTTATTAA AGAACTTGAT AATTTCCAAA ATTTAATTAT AGTAAAATCT TTAACTAAAT TATTTGCCTT TCCTGGAATA AGATTAGGTT ATGGATTAAG TTCTAATAAT AATTTTATAG AAAAAATAAA TTCAGTAGGA ACTCCTTGGA GTGTAAATAC CGTAGCAGAC TATGCAGGAA GAGAAGCATT AAAAGATGTT AAGTATATTA AAAACAGCGT AGCTTACATA AAAAAAGAAA ATGAATTTTT ATATAATGGC CTAGAAAATT TTAAAGATAT TACTACTTTT AAAGGTGCAG TAAATTTTAT ATTTTTTAAA TTGAATAAAA ATATAAATTT AAGAGAAGAA TTAATTAGAA GAGGTATTAT AATAAGAAGT TGTAGTAATT ATATTGGCTT AGACCATAGC TTCTATAGGG TGGCAGTTAG AACAAGGGAA GAAAACAAAA AGCTTTTAGA AGAACTTTCA AAGGTTTTAA AATAA
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Protein sequence | MNLGHGGNVE EIKRIYGLKE NKIIDFSANI NPLGISERVK EAMVRGINSI ERYPDITYYE LKKEISNFEK VALENIVLGN GAAEVIFNIV RGIKPKKALI VAPTFSEYED ALNSVECEVN HYILKDNYSV DNGFLEEIKE ELDIIFLCNP NNPTGALIEK DFSLKVLEKA KKMNITVVFD ESFLDFVEDN YRYSLIKELD NFQNLIIVKS LTKLFAFPGI RLGYGLSSNN NFIEKINSVG TPWSVNTVAD YAGREALKDV KYIKNSVAYI KKENEFLYNG LENFKDITTF KGAVNFIFFK LNKNINLREE LIRRGIIIRS CSNYIGLDHS FYRVAVRTRE ENKKLLEELS KVLK
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