Gene CPF_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1280 
Symbol 
ID4201042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp1454557 
End bp1455114 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content26% 
IMG OID638082162 
ProductPAP2 family protein 
Protein accessionYP_695727 
Protein GI110799074 
COG category[I] Lipid transport and metabolism 
COG ID[COG0671] Membrane-associated phospholipid phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0275929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTTTA TTCAAAATAT AGATATAAAT ATACTTTACT TTATACAAAA TAATATACAA 
AATAAGTTTC TTAATCCAAT AATGATTTTC TTAACTTCAT TAGGTAATTT AGGCTTTATA 
TGGATTGCCA TAAGCATCTT ACTTATAATT TCAAAAAAAT ATAGAAAAAT AGGATTATTA 
ACTTTAGCTG TTTTAATTGT TAACACCCTG CTTGGTGAAG GACTTCTTAA ACATATTATA 
GAAAGATCTA GACCCTTTGC AACATATGAA AGCTTACATA TAATGATACC TAAACCAAGT 
AGTTACTCTA TGCCCTCTGG TCATACCTCT GCATCCTTTG CAGCAGCATT TATGTTAGCT 
TATTATTTTA AAAATATAAG AGTATATATC TATTCCTTAG CTTCTTTAAT AGCTTTTTCT 
AGATTATACT TGCTTGTTCA CTATCCAAGT GATGTATTAA CAGGTGCTTT ACTAGGATAT 
TTAAGCTTCT TAATAGTTAT AAAATCCTAT GAACTTATAC AAAAATCTAA AATAAAAGAT 
CAAAGAAAGT CTTTTTAG
 
Protein sequence
MHFIQNIDIN ILYFIQNNIQ NKFLNPIMIF LTSLGNLGFI WIAISILLII SKKYRKIGLL 
TLAVLIVNTL LGEGLLKHII ERSRPFATYE SLHIMIPKPS SYSMPSGHTS ASFAAAFMLA 
YYFKNIRVYI YSLASLIAFS RLYLLVHYPS DVLTGALLGY LSFLIVIKSY ELIQKSKIKD 
QRKSF