Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1235 |
Symbol | |
ID | 4202916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1404332 |
End bp | 1406329 |
Gene Length | 1998 bp |
Protein Length | 665 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638082116 |
Product | potassium transporter |
Protein accession | YP_695681 |
Protein GI | 110799176 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3158] K+ transporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000105426 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACTA ATAAAAGTTC TATTGAAAAA ATTACTTTAG GAAGCTTTTT AATAGCCTTA GGAGTTGTTT ATGGAGATAT TGGAACTTCT CCTCTTTATG TTATGAAATC AATAATAAAT GGCAATGGAG GTTTAGAAAG CATTACTCCT GATTTTATCC TTGGAGTATT ATCTCTTATT TTTTGGACTA TGACTTTATT AACAACAATA AAGTATGTTC TTATAACATT AAAGGCTGAT AATAAGGGAG AAGGAGGTAT ATTTTCTCTT TATACCTTAG TTCGTCGTCG TGCTAAGTGG CTTATTATCC CTGCCATGGT AGGAGGTTCT GCTCTGCTAG CTGATGGAAT GCTAACCCCA GCAGTAACTG TTACTTCATC CATTGAAGGT TTAAAAATCT TGCCTAGTTT TAATGATATA TTTGGAAATA ATCAAGATAT AATTATAATC ATTGTACTAG TAATACTAAG TTTTTTATTC TTTATTCAAC ATTTTGGTAC AGAAATAATA GGTAAAATCT TTGGACCAGT TATGTTTATT TGGTTTGCAT TTTTAGCCAT ATTAGGAATT GTAAATTTAT CAGGAAATTT GTATCTTTTA AAAGCACTTT CTCCTCATTA TGCAATAAAA ATTTTATTTA GTCCAAATAA TCATTTAGGT TTTTTTATTC TTGGAGGAGT ATTTTTATCA ACAACTGGAG CTGAAGCTTT GTACTCTGAT CTTGGTCATG TTGGTAGAAA GAATATCTAT CTTACTTGGC CTTTAGTTAA AATATGCTTA CTATTAAATT ATTTTGGTCA AGCTGCTTGG ATATTATCAC AAAAAAATAA TACTAAATTA TATGGAATTG AAAGCTTAAA TCCATTTTTT CAAATGATGC CTAGTTGGCT TTTACTATTT GGAGTTTTAA TTTCTACATT AGCAGCTATT ATAGCATCTC AAGCTTTAAT TTCAGGTTCA TATACCTTAG TTTCAGAAGC TATTAAATTG AATTTATTCC CTAGATTACA ATGTCTTTAC CCTTCTAATT CTAAGGGACA AATTTACATG CCAGCTATAA ACAGAATACT TTGGATAGCT TGTATAGCTA TAGTTTTATA TTTTAGAAGT TCAGATAATA TGGAAGCAGC TTATGGATTA TCAATAACTG TAACAATGCT TATGACATCC ATACTTTTAT TCAATTATCT ATTAAAAATA AAAACTCCAT TACCAATTGC ACTAATTATA CTAGTCTTCT TTGGCTCTTT AGAATTTTCA TTCTTAATTT CAAGTGCAGT TAAATTCGAA AAAGGTGGTT TTGTTTCAGT ATTAATAGCT TTATGTATTT TAAGCATAAT GTATATATGG ATAAAAGGTC ATTATATAAA AATGAGTCTA TTAGACTATA TTCCTATTGA AAATTATAAA AATCAATTAA AAGAATTAAA GAATGATGTA GATAGACCTA AATATGCAAC AAATCTTGTT TATTTAACAA GTTCAGAAAA ATCCAAAAGA ATAGAAAGAA AAATAATGTA TTCTATATTA GATAAAAGGC CTAAAAGAGC AGATGTATAT TGGTTTGTAA ATGTAATTGT AACTGATGAA CCCTATACAG CTGAATATAC TGTAAATACA TTTGGCACTG ATTATATGGT TAAGGTGCAA CTTAAACTTG GTTTTAGGGT TAACCAAAAA CTAAATGTAT TTTTACGTCA AATAGTATGT GAACTTATAA ATAATGGTGA TATTAAGGTT CAAAATAGAA AGTATACTAC ACTTCCTAAC AGAAATGTAG GAGATTTCAG ATTTATTCTT ATAAATGAAT GTTTATCATC AGAAAGCAAG CTTAAATCAT GGAATTCAAT GATAATTAAA GCTAAGCTTT TCATAAAAAA ATTCACAGTT TCTCCAGCTA AATGGTTCGG CCTTGAATCT AGTGAAATTG AAATTGAAAA TGTTCCTTTA ATATTAGGAT CTACTGAACA CACTACTTTA AAACGTGTTT ATAAATAA
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Protein sequence | MSTNKSSIEK ITLGSFLIAL GVVYGDIGTS PLYVMKSIIN GNGGLESITP DFILGVLSLI FWTMTLLTTI KYVLITLKAD NKGEGGIFSL YTLVRRRAKW LIIPAMVGGS ALLADGMLTP AVTVTSSIEG LKILPSFNDI FGNNQDIIII IVLVILSFLF FIQHFGTEII GKIFGPVMFI WFAFLAILGI VNLSGNLYLL KALSPHYAIK ILFSPNNHLG FFILGGVFLS TTGAEALYSD LGHVGRKNIY LTWPLVKICL LLNYFGQAAW ILSQKNNTKL YGIESLNPFF QMMPSWLLLF GVLISTLAAI IASQALISGS YTLVSEAIKL NLFPRLQCLY PSNSKGQIYM PAINRILWIA CIAIVLYFRS SDNMEAAYGL SITVTMLMTS ILLFNYLLKI KTPLPIALII LVFFGSLEFS FLISSAVKFE KGGFVSVLIA LCILSIMYIW IKGHYIKMSL LDYIPIENYK NQLKELKNDV DRPKYATNLV YLTSSEKSKR IERKIMYSIL DKRPKRADVY WFVNVIVTDE PYTAEYTVNT FGTDYMVKVQ LKLGFRVNQK LNVFLRQIVC ELINNGDIKV QNRKYTTLPN RNVGDFRFIL INECLSSESK LKSWNSMIIK AKLFIKKFTV SPAKWFGLES SEIEIENVPL ILGSTEHTTL KRVYK
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