Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1224 |
Symbol | |
ID | 4201804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1393308 |
End bp | 1394303 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 21% |
IMG OID | 638082105 |
Product | hypothetical protein |
Protein accession | YP_695670 |
Protein GI | 110799235 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000979251 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAAGCA GAGTTAATAA AATAAATAAT CGTACAGTTG CTGCTTTAGG AATAAAAAGT TTAGATGAAA ATTTAGAGAA AAGTATAGTT AATATAATAA ATTGTAATCC AGAATATATT ATTTTAGGGT GTAGTGAAAT TCCTTTTACA GAAAGAATTT TGAAAGCTTT AAACAATGCT AATTGTCCTA AGATTTTAAT ACTTACCTTT AACTATAGGT TTAGAAATCA AAGAGAGATA GTTAATGAAA TTAAATTTAT GAAAAATTTC CCTGAAAATA ATATAGCAAT TATATTAAAT TCAGTAAATG ATTCTAATTT TATCTTAACG GATAAAATTT GTTATGTATC TTCAGGAAGT TTAAATAATA ATGGTATAGC AAACAATGTA AATTCCTATG AAATAATGAA TGACAAAGAT TGTAATTATA AATTATGGGA ATCAGAAATC TTTGATTTTA TAAATAAAGA AATAATAAAT TACAGGAGTA ATAATCAAAG GGAGCAAATA GAATACATTT TAAAGGAACT TAAAAAAAGG TTGTTTATCA ATATTTCTAA TAATTCCAAT ATATTAAATG AGGAGTATAT ATACATTCTT CTAGATATAT TAAATAGCAT AGATAGATTT ATTATGATAG GAACTGATGT TTATCAATAT TTTGATAGGG ATTTTTTAGA CATAATAAAG AGTAATAAAA AAATATTAGC TAAAATAAAT TCCATAAGAA ATGAATTATT TAGAATACTT TTAAACATCA ATGAAGGAAA GAATGATATT AATAACAAGA TTTTTAATTG CTTAAAAAAT GAATTTTTAG TTCTTTTAGA AGAATTAGAG GAGTTAATAA ATTTAAGAGA AAATAAATAT CATAATTCTA TTATGTCATG GAGAAAGGAT GAAAGTATAA GCTCATTTTT ATCAGCTAAT AATACAATTA ATAATTCTTT GATTAGGAAA TTCTATGAAA GAATTATTTT AAATTGTGAA AGATAA
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Protein sequence | MRSRVNKINN RTVAALGIKS LDENLEKSIV NIINCNPEYI ILGCSEIPFT ERILKALNNA NCPKILILTF NYRFRNQREI VNEIKFMKNF PENNIAIILN SVNDSNFILT DKICYVSSGS LNNNGIANNV NSYEIMNDKD CNYKLWESEI FDFINKEIIN YRSNNQREQI EYILKELKKR LFINISNNSN ILNEEYIYIL LDILNSIDRF IMIGTDVYQY FDRDFLDIIK SNKKILAKIN SIRNELFRIL LNINEGKNDI NNKIFNCLKN EFLVLLEELE ELINLRENKY HNSIMSWRKD ESISSFLSAN NTINNSLIRK FYERIILNCE R
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