Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1223 |
Symbol | |
ID | 4203555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1391813 |
End bp | 1392976 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638082104 |
Product | sodium:dicarboxylate symporter family protein |
Protein accession | YP_695669 |
Protein GI | 110800158 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00163296 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAGAAAT TATTTAATAA TCTTATTTTT AAACTTGTTT TAGGTGTTAT ATTAGGAATA ATAATAGGCA CATACTCTTC AGAGGGGCTT ATGTCAACAA TTGTGACAAT TAAGTATGTA TTGGGACAAA TTATATTTTT CTCTGTTCCA CTTATTATTT TAGGATTTAT AGCTCCATCT ATTGCTAAAT TAAAAGATAA CGCAAGCAAA CTATTAGGAT ATGCTGTTTT AATAGCTTAT TTATCTTCAG TTTTTGCTGC TATTCTTTCA ATGATTGCAG GATATGCATT AATACCTAAA TTATCTATAG TATCTAATAT AGCATCATTA AAGGAATTAC CAGAACTTAT ATTTAAATTA GATATACCAC CAGTTATGAG TGTAATGAGT GCGTTAGCTT TAGCATTACT TTTAGGATTA GCTGTTGGAT GGACAAAGGC TGATTTAGTA GAAAAGCTTT TAGATCAATT TCAAGCTATA GTACTTAGTA TTGTAAATAA AATAATAATA CCAATATTAC CATTTTTCAT AGCAACTAAC TTTGCAGCTT TAGCTTATGA AGGAGGATTA AGTAATCAAC TTCCTGTATT CTTTAAAGTT ATATTAATTG TATTATTTGG TCATTTTATA TGGTTAACAA TTTTATATTT AATAGGTGGA GCAATATCAA AAGAAAATCC ATGGGAAGTT GTAAAGTATT ATGGACCAGC ATATCTTACT GCAGTAGGTA CAATGTCAAG TGCAGCAACA TTACCAGTAG CTTTAGAGTC TGCAAAGAAA TCAAAGGCTT TAAGAGAAGA TATAGTGGAT TTTGCAATAC CATTATGTTC AAACATACAT TTATGTGGTT CAGTTCTTAC AGAAGTATTC TTTGTAATGA CAGTATCTCA AATTTTATAT GGTAAGATTC CGAGTTTACC AACTATGATA TTATTTATAG TATTATTAGG GGTGTTTGCA ATCGGGGCAC CAGGAGTCCC TGGGGGGACA GTAATGGCAT CATTAGGTTT AATAATTAGT GTATTAGCCT TTGATGAGGC TGGGACAGCT CTTATGTTAA CAATATTTGC TCTTCAAGAT AGTTTTGGAA CAGCATGTAA TGTAACTGGT GATGGAGCAA TAGCTCTTAT GCTGACAGGT ATAGCAAAGA AAAAGAACTT ATAA
|
Protein sequence | MKKLFNNLIF KLVLGVILGI IIGTYSSEGL MSTIVTIKYV LGQIIFFSVP LIILGFIAPS IAKLKDNASK LLGYAVLIAY LSSVFAAILS MIAGYALIPK LSIVSNIASL KELPELIFKL DIPPVMSVMS ALALALLLGL AVGWTKADLV EKLLDQFQAI VLSIVNKIII PILPFFIATN FAALAYEGGL SNQLPVFFKV ILIVLFGHFI WLTILYLIGG AISKENPWEV VKYYGPAYLT AVGTMSSAAT LPVALESAKK SKALREDIVD FAIPLCSNIH LCGSVLTEVF FVMTVSQILY GKIPSLPTMI LFIVLLGVFA IGAPGVPGGT VMASLGLIIS VLAFDEAGTA LMLTIFALQD SFGTACNVTG DGAIALMLTG IAKKKNL
|
| |