Gene CPF_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1194 
Symbol 
ID4203600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp1359527 
End bp1360279 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content24% 
IMG OID638082075 
Producthypothetical protein 
Protein accessionYP_695640 
Protein GI110800918 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0000543003 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAATT TAATAAAAGC AGAACTTTAT AAGATAGCAA GAAGACCTTT ATATATTACA 
ATTTGTATAA TATTTAATTT ACTTATAATT TTAGCCGGAA TAGCTATGCA TTATGCTTTC 
TTAGAAAATT CTAGAATACC TGATTTCTCA GCATTAGTTT TTATAACAAT TAACTTTATG 
GGAGCTATTC CATGGATAAT GCTTATGTTT ATAGATATAG TTTTAGAAGA ATATAAAGAA 
AATACTCTTA AAAATTTAAT TTCTTCAAGT ATATCAAGGG AAAAAGTGTA TTTAAGTAAA 
TATATAGTTC AGGTAATTAT ATTTTTAGTT ATTGAAATAA CAGCAGTATT AACTATGATA 
GGAACTTCTT ATGCCTTAGG ATTAGTTGGT CCTAATGGAT TTTCAGATTT TATGGAAGTA 
ATATTAAGAT TACTAATAGC TTTCCCAATA TATATTAGTG CATTAGCTAT ATATGATTTT 
ATTACCATAA TAACTAAAAA GGAAGGGTTA GCAGTTGTAG TTATCTTAGG TATTGTTTCT 
GGAGTACCAA TGATATTTTC TATATTATCA AGTATATATG AAGGAATTTT CACTTTAATT 
TATCCTTATT TATTATTTAA TCCTTTAAAG AGTTTAGTCA GTGAAGTTTT AACTACAAAA 
ATAATAGGAA CTAATATTAT AGTAGGAATA ATAAATACAG TAGTATTTTT AATTTTAGGA 
ATTTTAGTAA TAAGAAAACA AGAAGTTAAA TAA
 
Protein sequence
MLNLIKAELY KIARRPLYIT ICIIFNLLII LAGIAMHYAF LENSRIPDFS ALVFITINFM 
GAIPWIMLMF IDIVLEEYKE NTLKNLISSS ISREKVYLSK YIVQVIIFLV IEITAVLTMI 
GTSYALGLVG PNGFSDFMEV ILRLLIAFPI YISALAIYDF ITIITKKEGL AVVVILGIVS 
GVPMIFSILS SIYEGIFTLI YPYLLFNPLK SLVSEVLTTK IIGTNIIVGI INTVVFLILG 
ILVIRKQEVK