Gene CPF_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1175 
Symbol 
ID4203195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1340908 
End bp1341333 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content31% 
IMG OID638082056 
Productcoenzyme B12-dependent glycerol dehydratase, small subunit 
Protein accessionYP_695621 
Protein GI110799533 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4910] Propanediol dehydratase, small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.246505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATA AGAGAATGAC TGCTGCAGAT TATCCTTTAA CTTCTAAGAG AAAAGGAGAT 
ATAAAAACTC CTACAGGAAA AGCTTTAGAA GATATAACTT TAGAAAAAGT TTTAAGTGGA
GAAATCAATG CAGATGATAT AAGAATTTCA CCAGAAACTT TAGAAATGCA AGCTCAAATA
GCTGAAAGCA TGAACAGAGA TGCTATAGCT AGAAACTTTA GAAGAGCTGC GGAGCTTATA
AGAGTTCCAG ACGATAGAAT ATTAGAGATG TACAATGCTT TAAGACCATA TCGTTCAACA
AAAGAAGATT TATTCAAAAT AGCTGATGAA CTTGAAACAA AATATGATGC TAAAGTTAAT
GCTGATTTTG TTAGAGAAGC AGCTGAAGTA TATGAAACTA GAAATAAATT AAGAATAGAA
GAGTAA
 
Protein sequence
MENKRMTAAD YPLTSKRKGD IKTPTGKALE DITLEKVLSG EINADDIRIS PETLEMQAQI 
AESMNRDAIA RNFRRAAELI RVPDDRILEM YNALRPYRST KEDLFKIADE LETKYDAKVN
ADFVREAAEV YETRNKLRIE E