Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1147 |
Symbol | |
ID | 4202792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1310920 |
End bp | 1311867 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 638082028 |
Product | hypothetical protein |
Protein accession | YP_695593 |
Protein GI | 110800887 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000856874 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGAATAA TCGATATTAT ATTAAGCATA ACTATATTGA TTAGTAGTGC AGTTAATACA ATTATTGGCA AAGATAATAA ACTAATGAAC TATTCAGAAG ATAAGTTAAA TGAATTAGAA ATATATAATT CTGCTAGTTT AGAAAAATTT ATTTTAGAAA GAAATTTTGA AAGTTTATTA GATAAATCTA ATAAAGAATT TAGCCATAAT ATTGAGCAAG ACTTAATAGA TAATAGTTCA AATGTGGAAG AAGATAATTC ATATCCAGAG ACTAATAGAT TTAATAGAGA AAATAATTTA AAGGATTCTG TTATTAGAGA TGGATATGGT GCTTACATTG AAGATGGTTA CATAAAATTT GGAGAAAAAA ATAAGAGCTT AAGAATTTTT ACTAAAGGTA ATTATGAAAA TGATGGAGCT AAATTAGATT TAGATGTCAA TGATTATGAT GATACTAGAG AGCTTGAAAA TACTTATGGT TATTTAGTTG GAGAACAACC AATTAGTCTA GGTGGTTTAG ATAGTCGTTA TTACTTTGAA ACGGCAATAA TAAAAGGGGT GATGGTTGAA TATCCTAATA TAGTTGTTTT AGATAAAAAC TATCAATTAG ATGATAAATC GGCACTTTCT TTTAAGAGTA AGGATGGACT AATCGAGTTT TCTTTAGTTA ACCTTAAAAA TTATAATGAT GATGACAGTA AGTTTTTTTA TAAAAAAGAA ACTAGCTATG GAGAGGTATT AGAATCTATG TGTGGTGATG ATTGGTTTTA CTCATATACT AAAAAAAATG GTGAGATTAT ATATAGTTTA AAAGTTTTAG ATGGAGATAG ATTAAAAGGA TTTTCTTATA AGTTTCCAGT TCAATATAAA GATGAATTTA AGCCTATTAT AGAACGAAGT AGAAAAACCT TTGAAATGTT TAATGGTTTT CCAAAGAGTA TAAATTAA
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Protein sequence | MRIIDIILSI TILISSAVNT IIGKDNKLMN YSEDKLNELE IYNSASLEKF ILERNFESLL DKSNKEFSHN IEQDLIDNSS NVEEDNSYPE TNRFNRENNL KDSVIRDGYG AYIEDGYIKF GEKNKSLRIF TKGNYENDGA KLDLDVNDYD DTRELENTYG YLVGEQPISL GGLDSRYYFE TAIIKGVMVE YPNIVVLDKN YQLDDKSALS FKSKDGLIEF SLVNLKNYND DDSKFFYKKE TSYGEVLESM CGDDWFYSYT KKNGEIIYSL KVLDGDRLKG FSYKFPVQYK DEFKPIIERS RKTFEMFNGF PKSIN
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