Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1115 |
Symbol | |
ID | 4202968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1273190 |
End bp | 1274047 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638081996 |
Product | sugar ABC transporter, permease protein |
Protein accession | YP_695561 |
Protein GI | 110800191 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0469179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAATA AAGTGAAGAG TAGTGGAATT AAGAAAAAAG ACAAAAAACT ATGGGGATTA GAATTAGCAA TGATTCTATT AGCTGCTATA TGGTTTATAC CAATTTATTA TCTTATAGTA ACAACTTTTA AATCTCCTCA AGAAGCAACC GCTAGTCCAT TAGGAATTCC TAAGACTTGG ATTTTTGAAA ATTATTCTAA TGCGTGGAAA CAGATGAGTT TTCCAAGAGC TTTTGGAAAT ACAGTGTTTA TAACTGCCAC AGCGGTTATA TTGATTGTTG TTTTTGGATC TATGGCTGGA TATGCTTTAG CTAGAACAAA AACTAAACTT GGAAATCGTA TGTTTTTGCT TTTCCTTGCA GGATTAATAG TTCCATTCCA AATGAATATA GTAAGTTTAT ATAAAATCGT AAAGAGTTTA CATCTTATGA ATAGTGCCTT TGCTGTAATA TTAGTAAACG TAGCCATAAA CACACCTCAA GCAATATTTT TATTTAAAGA ATTTATAGAA GCTACTATTC CAATGGAGTT AGAGGAAGCT GCAGATATTG ATGGATGCGG AGTATTAAAA AAGTTTTTTA GAGTTATATT ACCACTTTTA AAACCAGTTA TTTCAACTGT AGTTATAATA GTAACTTTAA ATGTATGGAA TGAATTCTTA ACACCTTTAT TATTCTTACA AAGTAGAGAA AATGGAGTTA TTTTACAAGA AGTATCTAGA AATATAGGTC AATTCTCAAC TGACTGGACA GCACTTTTCC CAATGTTAAT GCTAGGAGTT GCACCTCTTA TGGTATTCTA TATATTTATG CAAAAATACA TAATAGGTGG AGTTACAACT GGAGCTGTTA AAGGTTAA
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Protein sequence | MMNKVKSSGI KKKDKKLWGL ELAMILLAAI WFIPIYYLIV TTFKSPQEAT ASPLGIPKTW IFENYSNAWK QMSFPRAFGN TVFITATAVI LIVVFGSMAG YALARTKTKL GNRMFLLFLA GLIVPFQMNI VSLYKIVKSL HLMNSAFAVI LVNVAINTPQ AIFLFKEFIE ATIPMELEEA ADIDGCGVLK KFFRVILPLL KPVISTVVII VTLNVWNEFL TPLLFLQSRE NGVILQEVSR NIGQFSTDWT ALFPMLMLGV APLMVFYIFM QKYIIGGVTT GAVKG
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