Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1094 |
Symbol | |
ID | 4202403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1248718 |
End bp | 1249590 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638081975 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_695540 |
Protein GI | 110800098 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0536636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGTTG TTAATAATGT AAGCAAGAAA TATGGAAGTT TTTATGCCCT TAAGGATATA AATTTAGAGT TTAATAATGG GGTATATGCT CTTTTAGCTC CTAATGGGGC TGGAAAGACA ACTTTAATTA AACTATTAAC CACATTAATT TTCCCAACTA GTGGAGAAAT ACTTTATAAG GGTACAGATA TAGTTTCATT AGATGGAGAG TATAGGGATA TTATAGGTTA TTTACCTCAG GACTTTGGAT ATTATAGAAA TTATACACCA AGAAAGTTTT TGCTATATTT AGCAGCTTTA AAGGGAATAA AAAAGGAAGA TGCAGTAGAA AAAGTAAAAG AGGTATTAAA AGTTGTTTCC TTAGAAAATG TTGAGAATAA AAAAATGAAG GGTTTTTCAG GAGGAATGAT TCAAAGGGTT GGAATAGCTC AAGCTTTGTT AAATGATCCT AAGATACTAA TTTTAGATGA GCCGACAGCA GGGTTAGACC CTAAGGAAAG AGTTAGATTT AGAAATTTAC TAAGTGATTT ATCAAGAGAT AGAATAGTAA TAATCTCAAC TCATATAGTT TCAGATATTG AGTTTATTTC TAATGAGGTA ATTATGATTA AGGATCATAA GATTTTATAT AAGGATTCCA TAGAAAATAT ATGTAGCACT TTAGATGGCA TGGTTTATGA AACCTCAATG ACCTTTGAGG AAAGTAAAGA GTTTAGAAAG AAATATATTT TATTATCAGA AAAGCAAGAT AGTGGAATAA TGAAAGCTAG GTTCATAAGC CAGGGGAATA ATGATGAAAA ATGGGTTAGG GTTAATCCTA ATATAGAGGA TGTATTCCTT TATCAATATA GAGATGAGGA GTTAGAAGGA TAA
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Protein sequence | MLVVNNVSKK YGSFYALKDI NLEFNNGVYA LLAPNGAGKT TLIKLLTTLI FPTSGEILYK GTDIVSLDGE YRDIIGYLPQ DFGYYRNYTP RKFLLYLAAL KGIKKEDAVE KVKEVLKVVS LENVENKKMK GFSGGMIQRV GIAQALLNDP KILILDEPTA GLDPKERVRF RNLLSDLSRD RIVIISTHIV SDIEFISNEV IMIKDHKILY KDSIENICST LDGMVYETSM TFEESKEFRK KYILLSEKQD SGIMKARFIS QGNNDEKWVR VNPNIEDVFL YQYRDEELEG
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