| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1082 |
|---|
| Symbol | |
|---|
| ID | 4201758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 1233775 |
|---|
| End bp | 1234200 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | 638081963 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_695528 |
|---|
| Protein GI | 110800772 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000105511 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATA ATACTATTTA TACAAACTTA GTTAGCACTA TTGCTAGAAA ATTAAAGTTT
TCAGCAGATA AAAAGATTAA TAATTTAGGA TTAAATTCTC AACAAGGTAG AGTTATACAG
TATATTTATG AACATCAAGA TGAAGGACTA ATACAAAAGG ACTTAGCAAA TGTATTTGGA
AGAACTACAG CAAGTATTAC AAGTATGCTA AAGGGCTTAG AAAAAAACGG ATACATCAGA
AGAGAAATCC CCTCTAATAA TGAAAGACAA AAGAACATAT ATGTAGAAAA AAAAGGTATA
GATCTTATAG AAACATTCAA TAAGAATTTT CTTGAAATTG AAGAGGATTT AACTTCCTCA
CTTACAGAAG AGGAAAAAGA AACTTTTCTA AAAATACTTA CTAAGATTAA TACTAACTTA
AAATAA
|
|---|
| Protein sequence | MNNNTIYTNL VSTIARKLKF SADKKINNLG LNSQQGRVIQ YIYEHQDEGL IQKDLANVFG
RTTASITSML KGLEKNGYIR REIPSNNERQ KNIYVEKKGI DLIETFNKNF LEIEEDLTSS
LTEEEKETFL KILTKINTNL K
|
|---|
| |