| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1052 |
|---|
| Symbol | fucP |
|---|
| ID | 4202981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 1200057 |
|---|
| End bp | 1201391 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 638081933 |
|---|
| Product | L-fucose permease |
|---|
| Protein accession | YP_695498 |
|---|
| Protein GI | 110800204 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0738] Fucose permease |
|---|
| TIGRFAM ID | [TIGR00885] L-fucose:H+ symporter permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.682471 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAAA TTGGTGCTAT TGAAAAAACA AAAACTAAGG AAGAAACAGC TATTGTACCT
AAAAAGTATA GAATGCATTT TATAATGCTT ATATCATGTT TTGTACTTTG GGGTCTTTTA
AATAATATGA CTGATAATCT TGTTCCTGCC TTTGGAAAGA TATTTATGTT AGAAGCTGCT
GACTCGTCTT TAGTACAAGT AGCTTTCTAT GGATCGTATG CAGTACTTGC CTTACCGGCA
GCAATACTTA TTAAAAAATA TTCCTATAGA AATGGAGTAT TAGTAGGTCT TGGATTATAT
ATAATTGGAG CAATGGGATA TATCCCAGCT GCCATGCTAC AAAATTTTAA TTTATTCTTA
GTATCAGTTT TTGTTTTAGC AGGGGGACTT TCAATACTAG AAACTACTTG TAATCCATAT
GTAATTTCTT TAGGGAGTGA AGAGACTAGT GTTCGTCGTT TAAATTTAGC ACAAGCCTTT
AACCCTATTG GCTCATTAGC TGGTATTATA ATGGCTAAAT ATATAATATT AGGGAATTTA
CATCCAGCAA CTTATGAAGA GAGAGTTGCT ATGGGATCAG AGGCTTTAAG TAAAATACAA
AACAATGAAT TAATATGGGT ATGTGTACCA TATGTTAGTT TAGTAGTTAT AGCTATAATA
ATTTGGTGCT TCTTTAAGAG AAGTAAAGGT TCAGAAAAAG ATAATTCAGG AGAACTTAAT
ATAATTGAAT CAATAAAGAA GTTAGTAAAA ATTCCACGTT ATGCCTTTGG AGTAATCACA
CAGTTTTTCT ATGTTGGAGT TCAAATAGCT GTTTGGACTT GGACTATAAA ATATGTAATG
GTTACTGTGG GGATAGATGA AGCATCTGCT GCTAAATATT ATCTTATAGC TATGTTTGGA
TTTATAGCAT GTCGTTGGAT TTGTACAGCA CTTATGAAAT ATATAGAACC AGGTATTATG
ATGGCAGTGT TTGCAGTACT TGGAATATTA TGTAGCTTAG GAGCAATTTA TTTACCTACA
AATTTATCAG TTTGGTCTTT AGTTTTAATT TCATCATGTA TGTCATTAAT GTTCCCAACA
ATTTATGGTA TAGCACTTGA AGGGTTAGGA AAAGAAGTAA AGGTTGGTGC AGCAGGTCTT
ATAATGGCAA TATTAGGTGG TGCAGTTATA ACACCTATAA TGGGATTATT TATTGATAGT
GGAAAATTAT CAAGTTTAGT TACTTCATAT CAAGGTGCAG AAGCTGCAGT TCGTTCAGCA
TTCTTTATAC CTGTAGTTTG TTTTGCAGTT GTTCTTATTT ATTCATTATG TTTTAGAAAG
AAAAAAGTAG CATAA
|
|---|
| Protein sequence | MEKIGAIEKT KTKEETAIVP KKYRMHFIML ISCFVLWGLL NNMTDNLVPA FGKIFMLEAA
DSSLVQVAFY GSYAVLALPA AILIKKYSYR NGVLVGLGLY IIGAMGYIPA AMLQNFNLFL
VSVFVLAGGL SILETTCNPY VISLGSEETS VRRLNLAQAF NPIGSLAGII MAKYIILGNL
HPATYEERVA MGSEALSKIQ NNELIWVCVP YVSLVVIAII IWCFFKRSKG SEKDNSGELN
IIESIKKLVK IPRYAFGVIT QFFYVGVQIA VWTWTIKYVM VTVGIDEASA AKYYLIAMFG
FIACRWICTA LMKYIEPGIM MAVFAVLGIL CSLGAIYLPT NLSVWSLVLI SSCMSLMFPT
IYGIALEGLG KEVKVGAAGL IMAILGGAVI TPIMGLFIDS GKLSSLVTSY QGAEAAVRSA
FFIPVVCFAV VLIYSLCFRK KKVA
|
|---|
| |