Gene CPF_1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1039 
Symbol 
ID4203828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp1187903 
End bp1188598 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content28% 
IMG OID638081920 
Productradical SAM domain-containing protein 
Protein accessionYP_695485 
Protein GI110800699 
COG category[C] Energy production and conversion 
COG ID[COG0731] Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0813206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATT TTACCTATAA AGAGGTTTAT ATTGAGGATG GAAAGAGAGT TTTAGAGATT 
AATGTGCTTC CAGAAAAGTA CTGTAATTTT GATTGTATAT TTTGTCCTAT AGGAAGATCA 
AAGAATAAAA TAGATACTCA AAAATCCTTT CATAATGTGG ATGAGGCATT AATTGAACTA 
GAAAATATGA TTAATGATAC AAAACCTGAT CTAATCTTTA TTAATTCAAA GGGAGAAGCC 
TTAATAAATG ATAAAATTGA GAATATTATA GATTTTATAA AATCAAAGGG AGTTCCTGTA 
AGACTACTTT CTAATGGGTA TATTCTAGGA AAGGATGATT ATATAAAGAT TGCTAATAAA 
TGTGATGAAG TTATTGGAGA AATAAAGGTA ATAACAGAGG AAGATTTTAA GAAGGTTCAA 
AGACCAATTG AAGGCTATAC CCTTCATGAA TACATATCAA ATATGGCCTC CTTTAATAAA 
CAATATAATG GAAAATTCAT ATTTGAAATA ACCATAGTTA AGGGATATAA TGATGACTCT 
GAATCAGTTA ATAAACTTAA GGAAGTTATA AAAGCAATCT CACCTAATGA GGTTATTGTT 
GCTAGAATTG ATGATGATAT ATTTAAGAAA AAACTTGGTA TATCTGATGA AAGATTTGAG 
GAAATTTCAA GGGAGCTATT AGATGTAAAC TGCTAA
 
Protein sequence
MNNFTYKEVY IEDGKRVLEI NVLPEKYCNF DCIFCPIGRS KNKIDTQKSF HNVDEALIEL 
ENMINDTKPD LIFINSKGEA LINDKIENII DFIKSKGVPV RLLSNGYILG KDDYIKIANK 
CDEVIGEIKV ITEEDFKKVQ RPIEGYTLHE YISNMASFNK QYNGKFIFEI TIVKGYNDDS 
ESVNKLKEVI KAISPNEVIV ARIDDDIFKK KLGISDERFE EISRELLDVN C