Gene CPF_1029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1029 
Symbol 
ID4202721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1181122 
End bp1181595 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content30% 
IMG OID638081910 
ProductMarR family transcriptional regulator 
Protein accessionYP_695475 
Protein GI110798575 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAG AGGAACAGGT TATAAGTGGT TTTAGAGACT TGTTTAACAA GCTGGCTTGG 
CTTAATAAGT CTAAGATGGA AAAGTGTCTT AAGGGGTATA AGCCTTCTGA AATACATTTT
ATTGAATATA TTGCTAAGAA TGTAGATTGT AATGTAACAA AACTTGCAGA GTCCTTTTAT
ATGACTAGGG GTGCAATAAG CAAGTTAAGT AAGAAACTTA TGGAAAAGGG CCTTATTGAA
AGTTACCAAA AGCAAGACAA CAAAAAGGAA ATCTATTTTA AACTTACTGA AAAAGGAAAG
GCAATTAATA AGATTCATGA TGATCTCCAT AAAGAGTTTC AAGAGCGTGA TAAAGCTGTC
TTTGATAAGA TAACTGAGGA ACAATTTGAT TATATGATTA ACTTTGCAAA AAAATATAGT
GATCATTTAG ATGAAGAAAT AAAGAAGATT GAGGTAAATA TTAAGTCAGA ATAA
 
Protein sequence
MNKEEQVISG FRDLFNKLAW LNKSKMEKCL KGYKPSEIHF IEYIAKNVDC NVTKLAESFY 
MTRGAISKLS KKLMEKGLIE SYQKQDNKKE IYFKLTEKGK AINKIHDDLH KEFQERDKAV
FDKITEEQFD YMINFAKKYS DHLDEEIKKI EVNIKSE