Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0847 |
Symbol | rbr |
ID | 4203730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1003079 |
End bp | 1003618 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638081730 |
Product | rubrerythrin |
Protein accession | YP_695297 |
Protein GI | 110799832 |
COG category | [C] Energy production and conversion |
COG ID | [COG1592] Rubrerythrin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0490534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTAA AAGGAAGTAA AACAGAAAAG AATCTTTTAA CAGCCTTTGC TGGAGAGTCA CAAGCTAGAA ATAAATATAC TTTCTATGCA GAGAAAGCTA GAAGAGAAGG ATATAATAAG ATAGCTGATA TCTTTGAAGA AACTGCTCAT AATGAGATGG CTCATGCAAA GATTTGGTTT AAATTTTTAA ATGATGGTAC AGTTGGAGAA ACTTTAGATA ATCTAAAGGA TGCAGCTGGT GGAGAAAACT ATGAATGGAC AGATATGTAT GCTGAGTTTG CTAAGGAAGC AAGAGAAGAA GGTTTTAATG AAATAGCATT CATATTAGAA AAAGTAGGAG AAATAGAAAA GCACCATGAA GAAAGATATT TAGAATTATA TAATCTATTG AAGAATGGTG AAATATTTAA AAAAGATGAA AAACAATTAT GGAGATGTCA AAACTGTGGA TTTATTTTAG AATCAACAGT AGCACCAGAA AAGTGCCCTG TTTGTCATCA TCCAAAAGCA TACTTTGAAC TAGTTTGCGA TAAATTCTAA
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Protein sequence | MDLKGSKTEK NLLTAFAGES QARNKYTFYA EKARREGYNK IADIFEETAH NEMAHAKIWF KFLNDGTVGE TLDNLKDAAG GENYEWTDMY AEFAKEAREE GFNEIAFILE KVGEIEKHHE ERYLELYNLL KNGEIFKKDE KQLWRCQNCG FILESTVAPE KCPVCHHPKA YFELVCDKF
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