Gene CPF_0818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0818 
Symbol 
ID4203580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp969127 
End bp970107 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content36% 
IMG OID638081702 
ProductPTS system mannose/fructose/sorbose family IIB subunit 
Protein accessionYP_695269 
Protein GI110800606 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA
[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 
TIGRFAM ID[TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component
[TIGR00854] PTS system, mannose/fructose/sorbose family, IIB component 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGGAA TTATTCTTGC TAGTCATGGG GAATTTGCTA AAGGCATATT ACAATCTGGC 
TCAATGATTT TTGGAGAACA GGAAAATGTA AAAGCTGTTA CATTAATGCC GAGTGAAGGA 
CCTGATGATA TTAGAGCAAA AATGAAAGAA GCAATCGCTT CCTTTGATAA TCAAGATGAG 
GTTTTATTCT TAGTTGATCT ATGGGGTGGA ACACCATTTA ACCAAGCAGA TAGCCTAGTT 
GAAGAACATA AAGACAAATG GGCAATCGTA GCTGGTATGA ATTTACCAAT GGTTATTGAA 
GCTTATGCTT CTCGTTTCTC AATGGAATCA GCACAAGAAA TTGCTGCTAA TATTCTAAAG 
TCAGCTAGAG AAGGAGTTAA AGTTAAGCCT GAATCATTAG AACCTGAAGA ATCTACTAAA 
GCTACTACAG ATTCTGCTCA ACAATCTAAC AATGTAGGTG CGCCTGGCTC TTTTGAATAC 
GTTTTGGCAC GTATTGATTC ACGTTTACTT CATGGTCAAG TAGCAACTGC TTGGACAAAA 
ACTGTAAAAC CAACAAGAAT TATTGTTGTA TCAGACGATG TAGCTAAAGA TGAACTTCGT 
AAGAAATTGA TTCAACAAGC AGCTCCTCCT GGAGTTAAAG CGCATACTGT TCCAGTTAGT 
CAAATGATTA AGCTTGCAAA AGATGATCAA CACTTTGGAG GACAGCGTGC ATTACTTCTT 
TTTGAAAACC CAGAAGATGT ACTTAGAGCA GTAGAGGGAG GAGTACCTAT AAAGACAGTT 
AATGTTGGTT CTATGGCTCA CTCTCCAGGT AAGGTTCAAC CAAATAAAGT ACTTGCTTTT 
AATCAAGAAG ATATTGACAC TTTTAATAAA CTTAAAGAAG CTGGATTAGA TTTTGATGTT 
CGTAAAGTTC CAAATGATAC AAAAGGAAAT ATGGATGAAA TTCTTAAAAA AGCACAAGAG 
GAATTAAATA AATTAAAATA A
 
Protein sequence
MVGIILASHG EFAKGILQSG SMIFGEQENV KAVTLMPSEG PDDIRAKMKE AIASFDNQDE 
VLFLVDLWGG TPFNQADSLV EEHKDKWAIV AGMNLPMVIE AYASRFSMES AQEIAANILK 
SAREGVKVKP ESLEPEESTK ATTDSAQQSN NVGAPGSFEY VLARIDSRLL HGQVATAWTK 
TVKPTRIIVV SDDVAKDELR KKLIQQAAPP GVKAHTVPVS QMIKLAKDDQ HFGGQRALLL 
FENPEDVLRA VEGGVPIKTV NVGSMAHSPG KVQPNKVLAF NQEDIDTFNK LKEAGLDFDV 
RKVPNDTKGN MDEILKKAQE ELNKLK