Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0796 |
Symbol | |
ID | 4202391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 944042 |
End bp | 944782 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638081680 |
Product | hypothetical protein |
Protein accession | YP_695247 |
Protein GI | 110799199 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000584679 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA CTTTATACGA TTATGAAGAA GCAATTAAAA AACTGCCTTT AAAAGATAAA TATACAAAAG AAGAACTTTT AACAGATGAT TTTCTTGTTA ATAAAGAGGG GAATATAGAA ATTTATTATG CTCCACATAA TGAATATATA AATCCTAATG CTAAAGTGTT TATAATTGGT ATAACTCCAG GTTTTAATCA AATGAGTACA GCTATAGCTA CAGCAAGAAA GGAATTAGAG AGTGGAGATA ATATTAAAGA AATTCAATAT AAATGCAAGG TGGCAGGGCG TTTTAGTGGA ACCTTAAGAA AAAATATAAT TAGCATGTTA AATGAGATAG AGCTTAATAA GGCTTTGAAA ATAAATGATT GTGGAGACCT TTTTGAAGAA AAGGATTATC TATTACATAC GGTATCTTTA ATTCCTTACT CTGTTTTTCT TAAGAAAGCC AATTATACAG GCCATACTCC AAAACTTATA AAGAGTGATT TTTTAATGAA GTATGTTTAT GAGAACTTTA TTGAGGAAAT TAAGAGTTTA GATGATTTTG AAAATATATT ATTAATACCT TTAGGAAAAG CAGTTGAGGA AGTACTATTT AAGCTTAAGG AAGAGGGATT TATAAGCGAG AGACAAATAC TTAAGGGATT TCCACATCCA TCAGGTGCAA ATGTAAATAG AATACCTCAA TTAAAGGAAA ATAAAGAAAG TATGATTAAA AAAATTAAAG AATTTTATTA A
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Protein sequence | MKKTLYDYEE AIKKLPLKDK YTKEELLTDD FLVNKEGNIE IYYAPHNEYI NPNAKVFIIG ITPGFNQMST AIATARKELE SGDNIKEIQY KCKVAGRFSG TLRKNIISML NEIELNKALK INDCGDLFEE KDYLLHTVSL IPYSVFLKKA NYTGHTPKLI KSDFLMKYVY ENFIEEIKSL DDFENILLIP LGKAVEEVLF KLKEEGFISE RQILKGFPHP SGANVNRIPQ LKENKESMIK KIKEFY
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