| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0773 |
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| Symbol | |
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| ID | 4203103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 920872 |
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| End bp | 921732 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 638081657 |
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| Product | sortase family protein |
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| Protein accession | YP_695224 |
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| Protein GI | 110801182 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00114802 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAAAA AAAATAATAA ATTAAGTTTA ATTTTTTCAT TTTTAATTTT CTTTATTGGA
GCTAGTATAT TTTTTTATCC AACTATTAGC GACTTGTGGA ATAAACATGT AAATAATCAA
TTAGAAGTAA AGTATAGTGA TAAAATCTCC AAAGAAAATA CTGTTGAAAA AGATAGAATT
TTAAATAAAG CAATAGAGTA TAATAAACAG CATTTAGTCA ATACGGTTAA AGATGTATTT
AGTAATAATG AATATTCAAA AGATAATGTA TATTATTCAT TACTTAATCC TAATAATGAT
GGCGTTATGG GGATTCTAGA AATACCTAAA ATAAATCAAA AACTAATTAT TTGGCATGGG
GTTGGAAAGG AAGCTCTTGA AAATGGGTGT GGACATATTG AAGGAACTTC GCTTCCTGTT
GGTGGAGAAG GAACCCATGC AGTTTTAGCA TCACATAGTG GTTTTACAAA TGCACGTTTA
TTTACTGATT TAGATAAGTT AAAAGAAGAT GATTTATTTT ATATTCAAGT TTTAGATAAA
AAGCTTGAAT ATAAAGTTGA TAAAATTTCA GTTGTATTAC CATCAGATCT TTCTCAGCTA
TCTATAGAAA AAGGAGAAGA CCTTGTTACA TTAATTACAT GTACACCATA TGGAGTAAAT
AGTCATAGGT TATTGGTTAG GGGGAAACGA ATGAACCATT TTAATAATTC CAAAGAGATA
AAAAATAGGG ATATAGACAT AGACAATTCT AATAAAAATA AGAAAATTTA TAGTTATATA
CTCTTAATAT TAGTTAGCTT AATAGCAATT ATTATTGTTA ATAAGATAGT AATAGATAAA
TCTAAAAAAA GAAAAGAGTG A
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| Protein sequence | MSKKNNKLSL IFSFLIFFIG ASIFFYPTIS DLWNKHVNNQ LEVKYSDKIS KENTVEKDRI
LNKAIEYNKQ HLVNTVKDVF SNNEYSKDNV YYSLLNPNND GVMGILEIPK INQKLIIWHG
VGKEALENGC GHIEGTSLPV GGEGTHAVLA SHSGFTNARL FTDLDKLKED DLFYIQVLDK
KLEYKVDKIS VVLPSDLSQL SIEKGEDLVT LITCTPYGVN SHRLLVRGKR MNHFNNSKEI
KNRDIDIDNS NKNKKIYSYI LLILVSLIAI IIVNKIVIDK SKKRKE
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