Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0727 |
Symbol | |
ID | 4201091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 863377 |
End bp | 864273 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 638081612 |
Product | LysR family transcriptional regulator |
Protein accession | YP_695179 |
Protein GI | 110800821 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAA CTTATCTTAG ATCTTTCTAT ACAACAGTTA AGTGTAATAG TATTTCTAAA GCTGCAAAAC AATTGCATTT AACTCAACCA GGAGTTAGTA TGCAAATTCA AAAACTTGAA AATGATATAA ATTTTAAACT TTTAAATAGA AGTAATACAG GAGTAAGTTT AACAAGTGCT GGTGAAATAA TCTTTGAATT TGCTGAATCA ATGTTATCCA TAGAAGATAA CCTACAAAAA AAATTAGATG AATTAAAAAA TATTAATTCA AAACTTATTA TTTCTTGTTG TAAAAGTTTA GGTGAGCATG TAATGCCTTG CAGTATATAT ACATTTAAAG AAATTCATTA TAAGACTGAT ATCTCTATGG AAATAGATAA TACCTCAGAT ATATTAAAAA AATTAACTAA TCATGAAACA AATATAGGCA TTATTCAAGG TAAACCTAGT GATTGTAAAA ACTTAGAACT TATTCCATTG ATGACTGATA AGCTAGTTTT AGTTGGTGGT AGAAATACTT CATTTAAATC AGTAAATGTT GAAGAACTTT ATAAACTTCC TTTAATAACA AGAGAAGATG GATCAGCTAA TAAATTATTG GTAGAATCAA GCTTAAAGAA AAATAAAATT AATATAGATA ATCTTAATTT TGTTTTATCA CTTAATTCTC CTCAATCAAT AAAATCTTCT GTATCTTTTG GACAAGGATA TTCATTTTTA CCTGCAATTT CTTTAAACCA TGAATTGAGA AGTGGTGAAT TAAAGAAAAT CGATATAAAT GATTTAAAAC TTCCTTTCCA ATACTATATT GCACTTAGAA AAAACTATAA ATTAGATTAT TATGAACAAA AATTTGTAGA TTTTCTAACC TCAAAAAAAA GGTGTTTTTG TTACTAA
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Protein sequence | MNLTYLRSFY TTVKCNSISK AAKQLHLTQP GVSMQIQKLE NDINFKLLNR SNTGVSLTSA GEIIFEFAES MLSIEDNLQK KLDELKNINS KLIISCCKSL GEHVMPCSIY TFKEIHYKTD ISMEIDNTSD ILKKLTNHET NIGIIQGKPS DCKNLELIPL MTDKLVLVGG RNTSFKSVNV EELYKLPLIT REDGSANKLL VESSLKKNKI NIDNLNFVLS LNSPQSIKSS VSFGQGYSFL PAISLNHELR SGELKKIDIN DLKLPFQYYI ALRKNYKLDY YEQKFVDFLT SKKRCFCY
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