| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0707 |
|---|
| Symbol | |
|---|
| ID | 4203402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 840919 |
|---|
| End bp | 842097 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638081592 |
|---|
| Product | aspartate aminotransferase |
|---|
| Protein accession | YP_695159 |
|---|
| Protein GI | 110799602 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.498645 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACTAG AGAATATGAT ATTAGATAAT GTGAAAAATA TGCCACCTTC AGGCATTAGA
AAATATTTTG ATTTAATAAA TGAAATGGAG GATGTTATTT CTTTAGGGGT TGGGGAGCCT
GATTTTGTAA CTCCATGGAA TGTTAGAGAG GCTGGGATTT ATTCTCTAGA GCAAGGACAT
ACTCACTATT CATCAAATGC AGGATTTATA GAATTAAGAG AAGAGATATC AAAGTATTTA
AATAGAAGAT TTTCTCTTAG ATATAATCCA AAGGATGAAA TACTTGTTAC TGTTGGGGGA
AGTGAAGGGA TAGATTTAGC ACTTAGAGCT TTAGTAGGTC CTGGAGATGA GGTTATAATA
CCTGAGCCAA GCTTTGTTGC TTATAAGGGA TGTACAGCAT TTACAGGAGC AACTGCCAAG
ACAATAGATT TAAGAGCTTG TGATGATTTT AAATTAACTC CAGAACTTTT AGAAGAGGCC
ATAACTGAGA AAACAAAGGT GGTAATAATT CCATTCCCTA ATAATCCTAC TGGAGCAATA
ATGAATAGAG AAGAGCTTCA AAAGATTGTG GATGTTTTAA AGGATAGGGA TGTAATAATT
ATTTCTGATG AAATATATGC AGAATTATCC TATGATGAGG ACCATGTTTC AATAGCTAGT
TTCCCGGAGG TAAAGGAAAA AACTATAGTA ATAAATGGAT TCTCTAAAGC TTATGCTATG
ACTGGATGGA GATTAGGATA TGTATGTGCT CATAAAGTTT TAATAGATGC TATGAAAAAG
ATACATCAGT ATGCAATAAT GTGTTCACCA ACAACGGCTC AGTATGCTGC TATTGAGGCT
CTTAAAAATG GTGATGAGAG CGTTTTTGAA ATGGCAAGGG AATATAATAG AAGAAGAAGA
GTATTAGTTG ATGGATTTAG AAGTATGGGA TTAGATTGTT TTGAACCATT AGGAGCTTTA
TATGTATTCC CATGTATAAA GTCAACTGGT ATGAGTTCAG ATGAATTTTG TGAAAAACTT
CTTCTTGAAG AGAAGGTACT AGCTGTTCCA GGAAATGCTT TTGGAGAGTG TGGAGAAGGT
TTTATAAGAG CTTGTTACGC AGCTTCAATG GAAGACATAA TGGAGGCTAT AAAGAGAATA
AGAAGATTTG TTGAAAGAAA TAATATGCAA GGGAAATAG
|
|---|
| Protein sequence | MILENMILDN VKNMPPSGIR KYFDLINEME DVISLGVGEP DFVTPWNVRE AGIYSLEQGH
THYSSNAGFI ELREEISKYL NRRFSLRYNP KDEILVTVGG SEGIDLALRA LVGPGDEVII
PEPSFVAYKG CTAFTGATAK TIDLRACDDF KLTPELLEEA ITEKTKVVII PFPNNPTGAI
MNREELQKIV DVLKDRDVII ISDEIYAELS YDEDHVSIAS FPEVKEKTIV INGFSKAYAM
TGWRLGYVCA HKVLIDAMKK IHQYAIMCSP TTAQYAAIEA LKNGDESVFE MAREYNRRRR
VLVDGFRSMG LDCFEPLGAL YVFPCIKSTG MSSDEFCEKL LLEEKVLAVP GNAFGECGEG
FIRACYAASM EDIMEAIKRI RRFVERNNMQ GK
|
|---|
| |