Gene CPF_0700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0700 
Symbol 
ID4203610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp834411 
End bp835268 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content23% 
IMG OID638081585 
Producthypothetical protein 
Protein accessionYP_695152 
Protein GI110800270 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00195734 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGAGA TAGATAATTA TATTGACTCT TTATATAAGA ATATTGATGG AATTTCAAAA 
GAAAATAAAG AGATAAAGGA AACTATGAGA ACTCATTTAA TAGAATCTGT AGAAGAATTA
AAATTAGAAG GATTTAGTGA AAAAGAGAGT ATTAAGATTG CTTTAGAACG ATTTGGAGAA
ATAAATGAAA TTAGAGGAGA ACTAAAAACT GTAGTGGAAA GAGGGGTAAA ACCACTACTA
TATACAGTGG GAATTTCATT AATAATACTT ATAGCCTTTT TTACTCATTT AATATTTATG
AGATTTGATT ATATAAAATT GATAGCTTTA ATAATTATTG CTGTTCCAAT GTATATAATA
ATTAGAGGTG GAGTTTTAAT ATATTATAAA GTAAAGGGTA TAAAATATAA TATAGATTGG
AAAAAGGAAT TATATAAATT TTTATTTGCT AATTATTTTA TATTTCTAGT TGGGTGGTAT
ATATTCCCTA TAGAAGTTGG AGGAAGCTCA AATGTTAATC TTCAAGTAGA CTTAATTCCT
TTTAAAAGTT ATATTGAATT AATGAATAGG GGAATAACTA TAGGATATCT TATGAAATGG
ATAATTATTA GATTGATTTT ATTTATACCT TTAGGATTTT ATCCAGCATT TCTAAAAGGA
AAATTTAATA ATATAGCTGG TTGTGTACTA ATAGCTTCTA TAGTTTATTT TATAGTTCCT
ATATTAGAAT TAATATTAAG TTTTGGATTA ATTTCTGTAC CAATAATTTA TATTGGAATA
GATTATTGGG TGATAAGTAT AATTGGAGTT TTACTTGGTT ATTTTTTATA TAATTCAATA
GCTAAAAAAC ATATTTAA
 
Protein sequence
MREIDNYIDS LYKNIDGISK ENKEIKETMR THLIESVEEL KLEGFSEKES IKIALERFGE 
INEIRGELKT VVERGVKPLL YTVGISLIIL IAFFTHLIFM RFDYIKLIAL IIIAVPMYII
IRGGVLIYYK VKGIKYNIDW KKELYKFLFA NYFIFLVGWY IFPIEVGGSS NVNLQVDLIP
FKSYIELMNR GITIGYLMKW IIIRLILFIP LGFYPAFLKG KFNNIAGCVL IASIVYFIVP
ILELILSFGL ISVPIIYIGI DYWVISIIGV LLGYFLYNSI AKKHI