Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0599 |
Symbol | rfbD |
ID | 4201281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 721082 |
End bp | 721966 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638081484 |
Product | dTDP-4-dehydrorhamnose reductase |
Protein accession | YP_695052 |
Protein GI | 110800859 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAT TAATAACAGG TTCAAATGGA CAATTAGGAA ATGAACTTCA ATCAATAATA AAAAGTGGAA AAGCAGAAAT AGGTTCAGTT AGTGAAAATA TAAAAAACTC AGAAGTTATT GCTTTAGATG TTGATAAATT AGATATAACT AGCTTAGAAA ATGTTAAAAA TGTACTTAAT GAAGAAAAAC CAGATGTAGT AATAAACTGT GCAGCGGCAA CAAATGTTGA CGGATGTGAA AGTAATGAAG ATTTTGCATT TAAAGTTAAT TCTTTAGGAG CAAGAAATTT AGCTATGGTT TGTGAAGAAA TTGGAGCTAA ATTAGTTCAA GTTTCAACAG ATTATGTATT TAGTGGTTTT GGTGAAAAAC CATTAACTGA GTTTGATTTA ACTGCACCTT ATAGTGTTTA TGGAAAAACA AAACTTTTAG GTGAAAATTA TGTTAAAGAG TTTTGTTCAA AATATTATAT AGTTAGAACC GCTTGGTTAT ATGGATATGT GGGACATAAC TTTGTTTACA CAATGATGAG ACTTGGAAAA GAAAAAGAAT CATTAAATGT AGTTAATGAT CAAAAAGGAA ATCCAACTCA CGCAAATGAT TTAGCATATC ATATATTAAA GCTTATAGAA ACAGAAGAAT ACGGAATATA CCATTGTACA GGAAAAGGGG AATGTACTTG GTATGATTTT GCTAAAGAAA TAATGGAGTT AGCTGGCAAT AAGTGCATTG TTAACCCATG TACTTCAGAA GAATATAAAA CACCAGCTAA AAGACCAGAA TATTCATCAT TAGATAATAT GATGCTTAGA TGTACAATTG GTGATGAAAT GAGAGATTGG AAGGAAGCTT TAAAAAGCTT TTTTGAAAAT CAACAAAATC AATAA
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Protein sequence | MKILITGSNG QLGNELQSII KSGKAEIGSV SENIKNSEVI ALDVDKLDIT SLENVKNVLN EEKPDVVINC AAATNVDGCE SNEDFAFKVN SLGARNLAMV CEEIGAKLVQ VSTDYVFSGF GEKPLTEFDL TAPYSVYGKT KLLGENYVKE FCSKYYIVRT AWLYGYVGHN FVYTMMRLGK EKESLNVVND QKGNPTHAND LAYHILKLIE TEEYGIYHCT GKGECTWYDF AKEIMELAGN KCIVNPCTSE EYKTPAKRPE YSSLDNMMLR CTIGDEMRDW KEALKSFFEN QQNQ
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